RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 NR1D1P20393 614 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 RPL13P26373 211 aaKnown RBP10.97□□□□□ -0.65
COPB1-201ENST00000249923 TNNC1P63316 161 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 ZNF211Q13398 564 aaPredicted RBP10.97□□□□□ -0.65
COPB1-201ENST00000249923 PLS1Q14651 629 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 CEP85LQ5SZL2 805 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 TMC3Q7Z5M5 1100 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 ELMO3Q96BJ8 720 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 HOOK2Q96ED9 719 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 TXLNGYQ9BZA5 131 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 SLC12A6Q9UHW9 1150 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 HIP1RO75146 1068 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 ENTPD3O75355 529 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 FGGP02679 453 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 GAP43P17677 238 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 USP8P40818 1118 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 ODR4Q5SWX8 454 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 MAEAQ7L5Y9 396 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 CCDC91Q7Z6B0 441 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 CBWD1Q9BRT8 395 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 APEX2Q9UBZ4 518 aa10.97□□□□□ -0.65
COPB1-201ENST00000249923 DDX39AO00148 427 aaKnown RBP10.96□□□□□ -0.65
COPB1-201ENST00000249923 GAS7O60861 476 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 FERP16591 822 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 STAT1P42224 750 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 TBC1D10BQ4KMP7 808 aaPredicted RBP10.96□□□□□ -0.65
COPB1-201ENST00000249923 FAM178BQ8IXR5 827 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 TAF4BQ92750 862 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 KRT35Q92764 455 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.96□□□□□ -0.65
COPB1-201ENST00000249923 PKD2L1Q9P0L9 805 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 INTUQ9ULD6 942 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 ZBTB21Q9ULJ3 1066 aa10.96□□□□□ -0.65
COPB1-201ENST00000249923 NPEPPSP55786 919 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 IFFO1Q0D2I5 559 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 BFSP1Q12934 665 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 NAA25Q14CX7 972 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 ARHGAP44Q17R89 818 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 GLG1Q92896 1179 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 AGBL1Q96MI9 1066 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 ZNF577Q9BSK1 485 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 MKNK1Q9BUB5 465 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 WDR11Q9BZH6 1224 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 PCIF1Q9H4Z3 704 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 SLC24A3Q9HC58 644 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.96□□□□□ -0.664e-6■■■■■ 49.1
COPB1-201ENST00000249923 TMOD4Q9NZQ9 345 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 SPDYE2BA6NHP3 402 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 TMEM253P0C7T8 217 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 SPDYE6P0CI01 402 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 VCAM1P19320 739 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 ANXA13P27216 316 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 KIF22Q14807 665 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 SPRED3Q2MJR0 410 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 MCTP2Q6DN12 878 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 C1orf131Q8NDD1 294 aaKnown RBP10.96□□□□□ -0.66
COPB1-201ENST00000249923 RFFLQ8WZ73 363 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 PCDHB18PQ96TA0 734 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 CD248Q9HCU0 757 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 ZDHHC18Q9NUE0 388 aa10.96□□□□□ -0.66
COPB1-201ENST00000249923 LOXHD1Q8IVV2 1947 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 IPO5O00410 1097 aaKnown RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 NFIBO00712 420 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 PTGISQ16647 500 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 UGCGQ16739 394 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 ZNF746Q6NUN9 644 aaPredicted RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 EIF1ADQ8N9N8 165 aaKnown RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 UBLCP1Q8WVY7 318 aaPredicted RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 FAM84AQ96KN4 292 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 TMEM39BQ9GZU3 492 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 DPH5Q9H2P9 285 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 PGAP2Q9UHJ9 254 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 TTC7AQ9ULT0 858 aaPredicted RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 A0A087WUV0 522 aaPredicted RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 TCRBV7S2A1N4TA0A589 114 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 GCOM1H8Y6P7 765 aaPredicted RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 ATMINO43313 823 aaPredicted RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 CPP00450 1065 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 POLR2MP0CAP2 368 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 GUCY2CP25092 1073 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 TMOD1P28289 359 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 CUL1Q13616 776 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 MIGA2Q7L4E1 593 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 PNMA8AQ86V59 439 aaPredicted RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 EFCAB13Q8IY85 973 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 TACO1Q9BSH4 297 aaKnown RBP10.95□□□□□ -0.66
COPB1-201ENST00000249923 PCDHA3Q9Y5H8 950 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 WDR81Q562E7 1941 aa10.95□□□□□ -0.66
COPB1-201ENST00000249923 SHBGP04278 402 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 CHRNB2P17787 502 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 GBP2P32456 591 aaPredicted RBP10.94□□□□□ -0.66
COPB1-201ENST00000249923 NF2P35240 595 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 PEX19P40855 299 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 MDH1P40925 334 aaKnown RBP10.94□□□□□ -0.66
COPB1-201ENST00000249923 MYL7Q01449 175 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 TTC27Q6P3X3 843 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 ZDHHC24Q6UX98 284 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 GPRC5CQ9NQ84 441 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 BAIAP2L1Q9UHR4 511 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 ZBTB12Q9Y330 459 aaPredicted RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms