RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 BICD1Q96G01 975 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 ZNF333Q96JL9 665 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 SMC6Q96SB8 1091 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 TMOD3Q9NYL9 352 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 STX8Q9UNK0 236 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 CHKBQ9Y259 395 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 WASF2Q9Y6W5 498 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 DCCP43146 1447 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 MAGEB6P1A0A0J9YX57 407 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 THAP12O43422 761 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 TJP3O95049 919 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 PDE8BO95263 885 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 GNA14O95837 355 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 FAM163BP0C2L3 166 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 NAPAP54920 295 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 DDB1Q16531 1140 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 ARMCX6Q7L4S7 300 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 CLIC5Q9NZA1 410 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 BLOC1S6Q9UL45 172 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 KIAA0391O15091 583 aaKnown RBP19.63■□□□□ 0.73
PTPN12-201ENST00000248594 FOXN2P32314 431 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 MARCKSL1P49006 195 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 BPIFB4P59827 614 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 CTTNQ14247 550 aaKnown RBP19.63■□□□□ 0.73
PTPN12-201ENST00000248594 HERC4Q5GLZ8 1057 aaPredicted RBP19.63■□□□□ 0.73
PTPN12-201ENST00000248594 DUPD1Q68J44 220 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 VSTM1Q6UX27 236 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 ZDHHC24Q6UX98 284 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 NT5DC3Q86UY8 548 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 PHF12Q96QT6 1004 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 FAM118BQ9BPY3 351 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 CDC42EP4Q9H3Q1 356 aaKnown RBP19.63■□□□□ 0.73
PTPN12-201ENST00000248594 NPHS2Q9NP85 383 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 ZDHHC18Q9NUE0 388 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 DDX18Q9NVP1 670 aaKnown RBP19.63■□□□□ 0.73
PTPN12-201ENST00000248594 PCDHA4Q9UN74 947 aa19.63■□□□□ 0.73
PTPN12-201ENST00000248594 POC1B-GALNT4F8VUJ3 575 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 MAPK13O15264 365 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 COQ9O75208 318 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 CYP2D6P10635 497 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 ALX1Q15699 326 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 MDH1BQ5I0G3 518 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 CGB2Q6NT52 195 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 CCDC137Q6PK04 289 aaKnown RBP19.62■□□□□ 0.73
PTPN12-201ENST00000248594 ADGRA1Q86SQ6 560 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 CYP4X1Q8N118 509 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 C4orf33Q8N1A6 199 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 SLC35G2Q8TBE7 412 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 C9orf72Q96LT7 481 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 YIPF2Q9BWQ6 316 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 TAOK3Q9H2K8 898 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 ZBTB1Q9Y2K1 713 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 LTN1O94822 1766 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 A0A0G2JND7 137 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 NUDT17P0C025 328 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 UQCRFS1P1P0C7P4 283 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 PFKFB3Q16875 520 aaPredicted RBP19.62■□□□□ 0.73
PTPN12-201ENST00000248594 LRRC55Q6ZSA7 311 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 LRRC57Q8N9N7 239 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 LARP4BQ92615 738 aaKnown RBP19.62■□□□□ 0.73
PTPN12-201ENST00000248594 ZFP69BQ9UJL9 534 aa19.62■□□□□ 0.73
PTPN12-201ENST00000248594 PCNTO95613 3336 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 ARHGAP44Q17R89 818 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 MTDHQ86UE4 582 aaKnown RBP19.61■□□□□ 0.73
PTPN12-201ENST00000248594 CEP70Q8NHQ1 597 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 CCSER1Q9C0I3 900 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 DCLRE1BQ9H816 532 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 DMAP1Q9NPF5 467 aaPredicted RBP19.61■□□□□ 0.73
PTPN12-201ENST00000248594 GJB6O95452 261 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 OATP04181 439 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 MARK3P27448 753 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 MAPK7Q13164 816 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 LRRC74BQ6ZQY2 392 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 PTF1AQ7RTS3 328 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 CKAP2Q8WWK9 683 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 C1orf167Q5SNV9 1468 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 BCL9LQ86UU0 1499 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 RASA4BC9J798 803 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 RASA4O43374 803 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 STK10O94804 968 aaKnown RBP19.61■□□□□ 0.73
PTPN12-201ENST00000248594 PPP2R5CQ13362 524 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 THOC5Q13769 683 aaKnown RBP19.61■□□□□ 0.73
PTPN12-201ENST00000248594 MESDQ14696 234 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 TMEM266Q2M3C6 531 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 RIBC1Q8N443 379 aaPredicted RBP19.61■□□□□ 0.73
PTPN12-201ENST00000248594 NRG4Q8WWG1 115 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 NUDT12Q9BQG2 462 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 PHTF1Q9UMS5 762 aa19.61■□□□□ 0.73
PTPN12-201ENST00000248594 MAGEA13PA6NCF6 341 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 IMPDH2P12268 514 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 RTP1P59025 263 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 SGSM1Q2NKQ1 1148 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 SLC51AQ86UW1 340 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 C1orf54Q8WWF1 131 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 TUBGCP5Q96RT8 1024 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 C7orf25Q9BPX7 421 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 ZWILCHQ9H900 591 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 ATXN10Q9UBB4 475 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 PCDHA6Q9UN73 950 aa19.6■□□□□ 0.73
PTPN12-201ENST00000248594 PCDHA8Q9Y5H6 950 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms