RNA–Protein interactions for RNA: ENST00000247003.8

DDX49-201, Transcript of DEAD-box helicase 49, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX49, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-201ENST00000247003 A0A0A6YYK5 440 aaPredicted RBP16.43■□□□□ 0.22
DDX49-201ENST00000247003 GRID2IPA4D2P6 1211 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 SPDYE16A6NNV3 312 aaPredicted RBP16.43■□□□□ 0.22
DDX49-201ENST00000247003 KCNA2P16389 499 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 ABCD1P33897 745 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 TNNT3P45378 269 aaPredicted RBP16.43■□□□□ 0.22
DDX49-201ENST00000247003 DMTNQ08495 405 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 MIS18BP1Q6P0N0 1132 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 ANO5Q75V66 913 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 SYCE1Q8N0S2 351 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 MCPH1Q8NEM0 835 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 U2AF1L4Q8WU68 220 aaKnown RBP16.43■□□□□ 0.22
DDX49-201ENST00000247003 DICER1Q9UPY3 1922 aaKnown RBP16.43■□□□□ 0.22
DDX49-201ENST00000247003 UTRNP46939 3433 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 KIAA1217Q5T5P2 1943 aa16.43■□□□□ 0.22
DDX49-201ENST00000247003 H0YCG3 227 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 DGAT1O75907 488 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 MATR3P43243 847 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDX49-201ENST00000247003 MXI1P50539 228 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 PRKG1Q13976 671 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 CASP8Q14790 479 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 ARHGAP44Q17R89 818 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 HSP90B2PQ58FF3 399 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 C8orf74Q6P047 294 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 MAP4K3Q8IVH8 894 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 CHST13Q8NET6 341 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 NLGN2Q8NFZ4 835 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.42■□□□□ 0.22
DDX49-201ENST00000247003 SEPT9Q9UHD8 586 aaPredicted RBP16.42■□□□□ 0.22
DDX49-201ENST00000247003 TBX20Q9UMR3 447 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 CES2O00748 559 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 NPTX2P47972 431 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 DNA2P51530 1060 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 SP4Q02446 784 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 RPS6KA1Q15418 735 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 SH3D19Q5HYK7 790 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 DNERQ8NFT8 737 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 SPIRE2Q8WWL2 714 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 CTNNBL1Q8WYA6 563 aaPredicted RBP16.42■□□□□ 0.22
DDX49-201ENST00000247003 IFT74Q96LB3 600 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 ST7Q9NRC1 585 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 KCNG1Q9UIX4 513 aa16.42■□□□□ 0.22
DDX49-201ENST00000247003 DENND3A2RUS2 1198 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 TISP43B9A030 160 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 DDX3XO00571 662 aaKnown RBP eCLIP16.41■□□□□ 0.221e-19■■■■□ 20.6
DDX49-201ENST00000247003 TERF2Q15554 542 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 STXBP2Q15833 593 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 GLE1Q53GS7 698 aaKnown RBP16.41■□□□□ 0.22
DDX49-201ENST00000247003 SWSAP1Q6NVH7 229 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 ANKRD35Q8N283 1001 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 TMEM161BQ8NDZ6 487 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 UBXN6Q9BZV1 441 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 ATP6V0A4Q9HBG4 840 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 SEPT11Q9NVA2 429 aaKnown RBP16.41■□□□□ 0.22
DDX49-201ENST00000247003 FBXO40Q9UH90 709 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 NENFQ9UMX5 172 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 CSADQ9Y600 493 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 PFASO15067 1338 aa16.41■□□□□ 0.22
DDX49-201ENST00000247003 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
DDX49-201ENST00000247003 TNFAIP3P21580 790 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 GCLMP48507 274 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 ACTR2P61160 394 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 DLG4P78352 724 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 PRKCEQ02156 737 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 SNRNP35Q16560 246 aaKnown RBP16.4■□□□□ 0.22
DDX49-201ENST00000247003 ZNF771Q7L3S4 317 aaPredicted RBP16.4■□□□□ 0.22
DDX49-201ENST00000247003 GLYCTKQ8IVS8 523 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 SELENOOQ9BVL4 669 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 VIPAS39Q9H9C1 493 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 UBE2TQ9NPD8 197 aaPredicted RBP16.4■□□□□ 0.22
DDX49-201ENST00000247003 IGSF9BQ9UPX0 1349 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 WDR81Q562E7 1941 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 SPATA31C2B4DYI2 1134 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 TULP1O00294 542 aaPredicted RBP16.4■□□□□ 0.22
DDX49-201ENST00000247003 LRRN2O75325 713 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 RTP1P59025 263 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 KIF22Q14807 665 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 EPC2Q52LR7 807 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 LNX1Q8TBB1 728 aaPredicted RBP16.4■□□□□ 0.22
DDX49-201ENST00000247003 BICD1Q96G01 975 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 PBKQ96KB5 322 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 SUGCTQ9HAC7 445 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 PDE11AQ9HCR9 933 aa16.4■□□□□ 0.22
DDX49-201ENST00000247003 TMCO5BA8MYB1 307 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 KCNK3O14649 394 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 PMM2O15305 246 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 RGS20O76081 388 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 KIF4AO95239 1232 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 TMEM253P0C7T8 217 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 CNGA1P29973 690 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 TNNC1P63316 161 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 PPP3CAQ08209 521 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 VGLL4Q14135 290 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 XKR3Q5GH77 459 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 PHLDB3Q6NSJ2 640 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 PEX26Q7Z412 305 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 CCDC60Q8IWA6 550 aaPredicted RBP16.39■□□□□ 0.21
DDX49-201ENST00000247003 TPCN2Q8NHX9 752 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 CCDC102AQ96A19 550 aa16.39■□□□□ 0.21
DDX49-201ENST00000247003 DCPSQ96C86 337 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms