RNA–Protein interactions for RNA: ENST00000243776.10

CHPF-201, Transcript of chondroitin polymerizing factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF, Length 3,013 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF-201ENST00000243776 CDC25CP30307 473 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 SNX1Q13596 522 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 TRAPPC3LQ5T215 181 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 NSMFQ6X4W1 530 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 FAM196AQ6ZSG2 479 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 PHLDB2Q86SQ0 1253 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 SLF2Q8IX21 1173 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 KIF2BQ8N4N8 673 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 PRELID2Q8N945 189 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 ATXN2LQ8WWM7 1075 aaKnown RBP20.08■□□□□ 0.8
CHPF-201ENST00000243776 KAT5Q92993 513 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 DYDC2Q96IM9 177 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 DDX23Q9BUQ8 820 aaKnown RBP20.08■□□□□ 0.8
CHPF-201ENST00000243776 UBE2TQ9NPD8 197 aaPredicted RBP20.08■□□□□ 0.8
CHPF-201ENST00000243776 AGAP1Q9UPQ3 857 aa20.08■□□□□ 0.8
CHPF-201ENST00000243776 GAKO14976 1311 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 A0A0A6YYK5 440 aaPredicted RBP20.07■□□□□ 0.8
CHPF-201ENST00000243776 TMEM253P0C7T8 217 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 MAPK7Q13164 816 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 TRIP13Q15645 432 aaPredicted RBP20.07■□□□□ 0.8
CHPF-201ENST00000243776 CCDC105Q8IYK2 499 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 DYDC1Q8WWB3 177 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 STK33Q9BYT3 514 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 THRAP3Q9Y2W1 955 aaKnown RBP20.07■□□□□ 0.8
CHPF-201ENST00000243776 NOD2Q9HC29 1040 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 GRHL1Q9NZI5 618 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 SMCHD1A6NHR9 2005 aa20.07■□□□□ 0.8
CHPF-201ENST00000243776 TNRC6CQ9HCJ0 1690 aaKnown RBP20.06■□□□□ 0.8
CHPF-201ENST00000243776 PPIP5K2O43314 1243 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 ZKSCAN8Q15776 578 aaPredicted RBP20.06■□□□□ 0.8
CHPF-201ENST00000243776 BARGINQ6ZT62 677 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 ANKS4BQ8N8V4 417 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 CCDC63Q8NA47 563 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 GDAP1Q8TB36 358 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 STAMBPL1Q96FJ0 436 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 THOC1Q96FV9 657 aaKnown RBP20.06■□□□□ 0.8
CHPF-201ENST00000243776 CNOT10Q9H9A5 744 aaKnown RBP20.06■□□□□ 0.8
CHPF-201ENST00000243776 ARFGEF1Q9Y6D6 1849 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 ZMYM2Q9UBW7 1377 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 SRRM3A6NNA2 597 aaPredicted RBP20.06■□□□□ 0.8
CHPF-201ENST00000243776 EXOC3O60645 756 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 VCAM1P19320 739 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 ATP2B4P23634 1241 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 CDC42EP5Q6NZY7 148 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 CCDC137Q6PK04 289 aaKnown RBP20.06■□□□□ 0.8
CHPF-201ENST00000243776 SEPT14Q6ZU15 432 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 SYCP3Q8IZU3 236 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 ZSWIM2Q8NEG5 633 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 BORCS6Q96GS4 357 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 SAMD15Q9P1V8 674 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 CTNNAL1Q9UBT7 734 aa20.06■□□□□ 0.8
CHPF-201ENST00000243776 ATP6V1G2O95670 118 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 CALCAP01258 141 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 EZRP15311 586 aaKnown RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 EIF3BP55884 814 aaKnown RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 KCNJ2P63252 427 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 TNIP1Q15025 636 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 PRCCQ92733 491 aaPredicted RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 PWWP2AQ96N64 755 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 DNAJC18Q9H819 358 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 A1CFQ9NQ94 594 aaKnown RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 KCNQ5Q9NR82 932 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 CCDC169A6NNP5 214 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 DDX39AO00148 427 aaKnown RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 PYGMP11217 842 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 COMTP21964 271 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 VPS41P49754 854 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 MYL7Q01449 175 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 XRCC4Q13426 336 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 FAM163AQ96GL9 167 aaPredicted RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 CARD9Q9H257 536 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 KCNK9Q9NPC2 374 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 SBF2Q86WG5 1849 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 EIF4E1BA6NMX2 242 aaKnown RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 SKAP2O75563 359 aaPredicted RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 MMP13P45452 471 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 CLNS1AP54105 237 aaKnown RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 LACTB2Q53H82 288 aaPredicted RBP20.05■□□□□ 0.8
CHPF-201ENST00000243776 ARHGEF19Q8IW93 802 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 KDM4CQ9H3R0 1056 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 FGFR1OP2Q9NVK5 253 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 TRPC6Q9Y210 931 aa20.05■□□□□ 0.8
CHPF-201ENST00000243776 A8MUI8 341 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 GBP2P32456 591 aaPredicted RBP20.04■□□□□ 0.8
CHPF-201ENST00000243776 PTGIRP43119 386 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 RBM5P52756 815 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHPF-201ENST00000243776 NPEPPSP55786 919 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 MYO1EQ12965 1108 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 ODR4Q5SWX8 454 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 RPUSD2Q8IZ73 545 aaKnown RBP20.04■□□□□ 0.8
CHPF-201ENST00000243776 C1orf54Q8WWF1 131 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 VEZTQ9HBM0 779 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 APEX2Q9UBZ4 518 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 TRIM33Q9UPN9 1127 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 STK38LQ9Y2H1 464 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 RASGRF2O14827 1237 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 UBOX5O94941 541 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 CFBP00751 764 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 GCLMP48507 274 aa20.04■□□□□ 0.8
CHPF-201ENST00000243776 FAM178BQ8IXR5 827 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms