RNA–Protein interactions for RNA: ENST00000242729.6

SSPN-201, Transcript of sarcospan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSPN, Length 2,788 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-201ENST00000242729 NOVA2Q9UNW9 492 aaKnown RBP18.24■□□□□ 0.51
SSPN-201ENST00000242729 PTPN22Q9Y2R2 807 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 SPDYE2BA6NHP3 402 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 MYO1FO00160 1098 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 VIL1P09327 827 aaKnown RBP18.24■□□□□ 0.51
SSPN-201ENST00000242729 SPDYE6P0CI01 402 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 MAGEA9P43362 315 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 PLTPP55058 493 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 PEX3P56589 373 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 SPP2Q13103 211 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 RPUSD2Q8IZ73 545 aaKnown RBP18.24■□□□□ 0.51
SSPN-201ENST00000242729 PPM1KQ8N3J5 372 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 LMBR1Q8WVP7 490 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 ZNF341Q9BYN7 854 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 TOPORSQ9NS56 1045 aaPredicted RBP18.24■□□□□ 0.51
SSPN-201ENST00000242729 ZHX2Q9Y6X8 837 aa18.24■□□□□ 0.51
SSPN-201ENST00000242729 FRMPD4Q14CM0 1322 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 TCRBV7S2A1N4TA0A589 114 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 ENTPD3O75355 529 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 SGPL1O95470 568 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 SSTR3P32745 418 aaPredicted RBP18.23■□□□□ 0.51
SSPN-201ENST00000242729 HSPA9P38646 679 aaKnown RBP18.23■□□□□ 0.51
SSPN-201ENST00000242729 RNF187Q5TA31 235 aaPredicted RBP18.23■□□□□ 0.51
SSPN-201ENST00000242729 MDM1Q8TC05 714 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 RFFLQ8WZ73 363 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 SUCLA2Q9P2R7 463 aaPredicted RBP18.23■□□□□ 0.51
SSPN-201ENST00000242729 NENFQ9UMX5 172 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 EIF3DO15371 548 aaKnown RBP eCLIP18.23■□□□□ 0.51
SSPN-201ENST00000242729 ITGB3BPQ13352 177 aaPredicted RBP18.23■□□□□ 0.51
SSPN-201ENST00000242729 RUBCNQ92622 972 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 FZD1Q9UP38 647 aa18.23■□□□□ 0.51
SSPN-201ENST00000242729 DDX3YO15523 660 aaKnown RBP18.22■□□□□ 0.51
SSPN-201ENST00000242729 CYP26A1O43174 497 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 ATP2C2O75185 946 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 LMNB1P20700 586 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 HOXA7P31268 230 aaPredicted RBP18.22■□□□□ 0.51
SSPN-201ENST00000242729 NBPF9Q3BBW0 867 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 KRT71Q3SY84 523 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 TTC31Q49AM3 519 aaPredicted RBP18.22■□□□□ 0.51
SSPN-201ENST00000242729 SLFN11Q7Z7L1 901 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 CNOT8Q9UFF9 292 aaKnown RBP18.22■□□□□ 0.51
SSPN-201ENST00000242729 UTP11Q9Y3A2 253 aaKnown RBP18.22■□□□□ 0.51
SSPN-201ENST00000242729 TELO2Q9Y4R8 837 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 CCDC169A6NNP5 214 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 BTNL10A8MVZ5 291 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 SHBGP04278 402 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 FAM102BQ5T8I3 360 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 DAB2IPQ5VWQ8 1189 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 SLC47A2Q86VL8 602 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 DHX38Q92620 1227 aaKnown RBP18.22■□□□□ 0.51
SSPN-201ENST00000242729 AGPAT1Q99943 283 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 MRPL11Q9Y3B7 192 aaKnown RBP18.22■□□□□ 0.51
SSPN-201ENST00000242729 ALG6Q9Y672 507 aa18.22■□□□□ 0.51
SSPN-201ENST00000242729 ATP9AO75110 1047 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 CLSTN1O94985 981 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 KCNJ1P48048 391 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 MAGOHP61326 146 aaKnown RBP18.21■□□□□ 0.51
SSPN-201ENST00000242729 IFFO1Q0D2I5 559 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 CBWD2Q8IUF1 395 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 SYCE1Q8N0S2 351 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 LARGE2Q8N3Y3 721 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 CHURC1Q8WUH1 139 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 MAGOHBQ96A72 148 aaKnown RBP18.21■□□□□ 0.51
SSPN-201ENST00000242729 PCDHB18PQ96TA0 734 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 VCPKMTQ9H867 229 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 TMBIM4Q9HC24 238 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 QSER1Q2KHR3 1735 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 PPP1R37O75864 691 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 SLCO1A2P46721 670 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 VAMP7P51809 220 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 SKOR1P84550 965 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 DR1Q01658 176 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 KDM7AQ6ZMT4 941 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 OGFOD1Q8N543 542 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 LMO3Q8TAP4 145 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 KAT2BQ92831 832 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 MXRA8Q9BRK3 442 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 RANBP17Q9H2T7 1088 aaKnown RBP18.21■□□□□ 0.51
SSPN-201ENST00000242729 MYH11P35749 1972 aa18.21■□□□□ 0.51
SSPN-201ENST00000242729 H0YGN5 161 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 MDH1P40925 334 aaKnown RBP18.2■□□□□ 0.5
SSPN-201ENST00000242729 LMBRD2Q68DH5 695 aaPredicted RBP18.2■□□□□ 0.5
SSPN-201ENST00000242729 LLGL2Q6P1M3 1020 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 CCT8L2Q96SF2 557 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 PI4K2AQ9BTU6 479 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 DMAC2Q9NW81 257 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 NFS1Q9Y697 457 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 GTPBP10A4D1E9 387 aaKnown RBP18.2■□□□□ 0.5
SSPN-201ENST00000242729 TMEM253P0C7T8 217 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 IFT88Q13099 833 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 PTGISQ16647 500 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 TMC3Q7Z5M5 1100 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 TADA2BQ86TJ2 420 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 ZDHHC14Q8IZN3 488 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 CCDC26Q8TAB7 109 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 HSPBP1Q9NZL4 362 aa18.2■□□□□ 0.5
SSPN-201ENST00000242729 TESPA1A2RU30 521 aaPredicted RBP18.19■□□□□ 0.5
SSPN-201ENST00000242729 ADRB2P07550 413 aa18.19■□□□□ 0.5
SSPN-201ENST00000242729 MMEP08473 750 aa18.19■□□□□ 0.5
SSPN-201ENST00000242729 GUCY2CP25092 1073 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms