RNA–Protein interactions for RNA: ENST00000238628.10

IFT43-201, Transcript of intraflagellar transport 43, humanhuman

TSL 1 (best) BASIC

Gene IFT43, Length 816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-201ENST00000238628 STAMQ92783 540 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 PPP1R16BQ96T49 567 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 MTA3Q9BTC8 594 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 FAM126AQ9BYI3 521 aaPredicted RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 TMEM117Q9H0C3 514 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 AGO4Q9HCK5 861 aaKnown RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 SLC2A4RGQ9NR83 387 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 MTF2Q9Y483 593 aaPredicted RBP9.46□□□□□ -0.9
IFT43-201ENST00000238628 DENND4AQ7Z401 1863 aa9.46□□□□□ -0.9
IFT43-201ENST00000238628 SPEGQ15772 3267 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 IGKV6D-21A0A0A0MT36 114 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 DDX39AO00148 427 aaKnown RBP9.45□□□□□ -0.9
IFT43-201ENST00000238628 TM4SF5O14894 197 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 ZZEF1O43149 2961 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 HOXA2O43364 376 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 KCNK5O95279 499 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 FOSP01100 380 aaPredicted RBP9.45□□□□□ -0.9
IFT43-201ENST00000238628 GSPT1P15170 499 aaKnown RBP9.45□□□□□ -0.9
IFT43-201ENST00000238628 ZSCAN20P17040 1043 aaPredicted RBP9.45□□□□□ -0.9
IFT43-201ENST00000238628 SPINK2P20155 84 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 MCM5P33992 734 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 ZNF76P36508 570 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 ITGB3BPQ13352 177 aaPredicted RBP9.45□□□□□ -0.9
IFT43-201ENST00000238628 KIZQ2M2Z5 673 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 CEP55Q53EZ4 464 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 SWSAP1Q6NVH7 229 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 ABHD15Q6UXT9 468 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 HEATR3Q7Z4Q2 680 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 FAM228AQ86W67 206 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 RAB11FIP4Q86YS3 637 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 ABI1Q8IZP0 508 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 METTL13Q8N6R0 699 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 FANCBQ8NB91 859 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 AUTS2Q8WXX7 1259 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 MAP4K1Q92918 833 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 PGBD1Q96JS3 809 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 CASD1Q96PB1 797 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 OSMRQ99650 979 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 ADAM33Q9BZ11 813 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 ZNF302Q9NR11 478 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 EPS15L1Q9UBC2 864 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 SLC12A7Q9Y666 1083 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 COL1A2P08123 1366 aa9.45□□□□□ -0.9
IFT43-201ENST00000238628 MEIS1O00470 390 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 SH2B2O14492 632 aaPredicted RBP9.44□□□□□ -0.9
IFT43-201ENST00000238628 SGSM2O43147 1006 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 GPR32O75388 356 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 GABBR2O75899 941 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 CCNE2O96020 404 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 LIFRP42702 1097 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 LIMK1P53667 647 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 NRLP54845 237 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 NAPAP54920 295 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 GPC5P78333 572 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 GIT2Q14161 759 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 SIM2Q14190 667 aaPredicted RBP9.44□□□□□ -0.9
IFT43-201ENST00000238628 DSC3Q14574 896 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 ZBTB41Q5SVQ8 909 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 PSAPL1Q6NUJ1 521 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 MIS18BP1Q6P0N0 1132 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 PDXDC2PQ6P474 469 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 C15orf39Q6ZRI6 1047 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 TRMT1LQ7Z2T5 733 aaKnown RBP9.44□□□□□ -0.9
IFT43-201ENST00000238628 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.44□□□□□ -0.9
IFT43-201ENST00000238628 PPFIBP1Q86W92 1011 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 CKAP2LQ8IYA6 745 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 BBXQ8WY36 941 aaPredicted RBP9.44□□□□□ -0.9
IFT43-201ENST00000238628 TMEM121BQ9BXQ6 578 aaPredicted RBP9.44□□□□□ -0.9
IFT43-201ENST00000238628 OSBPL6Q9BZF3 934 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 RIC8AQ9NPQ8 531 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 RBM8AQ9Y5S9 174 aaKnown RBP9.44□□□□□ -0.9
IFT43-201ENST00000238628 WDR81Q562E7 1941 aa9.44□□□□□ -0.9
IFT43-201ENST00000238628 SMCO2A6NFE2 343 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 NCAM2O15394 837 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 VTNP04004 478 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 ATP4AP20648 1035 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 CD72P21854 359 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 METAP2P50579 478 aaKnown RBP eCLIP9.43□□□□□ -0.9
IFT43-201ENST00000238628 NLRP11P59045 1033 aaKnown RBP9.43□□□□□ -0.9
IFT43-201ENST00000238628 MLF2Q15773 248 aaPredicted RBP9.43□□□□□ -0.9
IFT43-201ENST00000238628 WWC2Q6AWC2 1192 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 SYNE3Q6ZMZ3 975 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 TMTC3Q6ZXV5 915 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 PLA2G4DQ86XP0 818 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 CCDC60Q8IWA6 550 aaPredicted RBP9.43□□□□□ -0.9
IFT43-201ENST00000238628 VPS52Q8N1B4 723 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 SLC39A11Q8N1S5 342 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 LRRC43Q8N309 656 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 C12orf50Q8NA57 414 aaPredicted RBP9.43□□□□□ -0.9
IFT43-201ENST00000238628 RNF169Q8NCN4 708 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 ST13P5Q8NFI4 369 aaPredicted RBP9.43□□□□□ -0.9
IFT43-201ENST00000238628 EXOC6Q8TAG9 804 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 TMEM169Q96HH4 297 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 MYADMQ96S97 322 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 ANO3Q9BYT9 981 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 WDR6Q9NNW5 1121 aaKnown RBP9.43□□□□□ -0.9
IFT43-201ENST00000238628 PRMT8Q9NR22 394 aaPredicted RBP9.43□□□□□ -0.9
IFT43-201ENST00000238628 RNF19AQ9NV58 838 aa9.43□□□□□ -0.9
IFT43-201ENST00000238628 DACH1Q9UI36 760 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms