RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 GGA2Q9UJY4 613 aa16.84■□□□□ 0.29
CTSD-201ENST00000236671 NR2E1Q9Y466 385 aa16.84■□□□□ 0.29
CTSD-201ENST00000236671 WDR90Q96KV7 1748 aa16.84■□□□□ 0.29
CTSD-201ENST00000236671 SLITRK3O94933 977 aa16.84■□□□□ 0.29
CTSD-201ENST00000236671 OTOP1Q7RTM1 612 aa16.84■□□□□ 0.29
CTSD-201ENST00000236671 KSR1Q8IVT5 923 aa16.84■□□□□ 0.29
CTSD-201ENST00000236671 PRPF38AQ8NAV1 312 aaKnown RBP16.84■□□□□ 0.29
CTSD-201ENST00000236671 PARVGQ9HBI0 331 aa16.84■□□□□ 0.29
CTSD-201ENST00000236671 UTP11Q9Y3A2 253 aaKnown RBP16.84■□□□□ 0.29
CTSD-201ENST00000236671 RBBP6Q7Z6E9 1792 aaKnown RBP16.83■□□□□ 0.29
CTSD-201ENST00000236671 ZBTB39O15060 712 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 UBE4BO95155 1302 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 PTENP60484 403 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 ABCB5Q2M3G0 1257 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 EAPPQ56P03 285 aaPredicted RBP16.83■□□□□ 0.28
CTSD-201ENST00000236671 BTNL9Q6UXG8 535 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 ZNF784Q8NCA9 323 aaPredicted RBP16.83■□□□□ 0.28
CTSD-201ENST00000236671 CTNNBL1Q8WYA6 563 aaPredicted RBP16.83■□□□□ 0.28
CTSD-201ENST00000236671 ARHGEF26Q96DR7 871 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 CYFIP2Q96F07 1278 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 DYDC2Q96IM9 177 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 PRMT6Q96LA8 375 aaPredicted RBP16.83■□□□□ 0.28
CTSD-201ENST00000236671 TRIM51Q9BSJ1 452 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 INTS2Q9H0H0 1204 aaKnown RBP16.83■□□□□ 0.28
CTSD-201ENST00000236671 DPH5Q9H2P9 285 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 MYOZ2Q9NPC6 264 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 PPANQ9NQ55 473 aaKnown RBP16.83■□□□□ 0.28
CTSD-201ENST00000236671 CAPN7Q9Y6W3 813 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 SCN4AP35499 1836 aa16.83■□□□□ 0.28
CTSD-201ENST00000236671 PSMD10O75832 226 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 BMP3P12645 472 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 ABCB4P21439 1286 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 ZNF131P52739 623 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 PPP2R2AP63151 447 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 JAG1P78504 1218 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 DHX9Q08211 1270 aaKnown RBP16.82■□□□□ 0.28
CTSD-201ENST00000236671 PLS1Q14651 629 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 TPH2Q8IWU9 490 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 AGBL3Q8NEM8 1001 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 TXLNGYQ9BZA5 131 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 AGPAT3Q9NRZ7 376 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 DMAC2Q9NW81 257 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
CTSD-201ENST00000236671 DIS3Q9Y2L1 958 aaKnown RBP16.82■□□□□ 0.28
CTSD-201ENST00000236671 CLRN2A0PK11 232 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 DCDC2CA8MYV0 355 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 TRIM49P0CI25 452 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 TRIM49CP0CI26 452 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 HNRNPH1P31943 449 aaKnown RBP16.82■□□□□ 0.28
CTSD-201ENST00000236671 PPP2R5CQ13362 524 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 C6orf89Q6UWU4 347 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 ZNF720Q7Z2F6 126 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 L3MBTL3Q96JM7 780 aaPredicted RBP16.82■□□□□ 0.28
CTSD-201ENST00000236671 CARD9Q9H257 536 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 LRRC4CQ9HCJ2 640 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 APEX2Q9UBZ4 518 aa16.82■□□□□ 0.28
CTSD-201ENST00000236671 CHMP2AO43633 222 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 PPFIA2O75334 1257 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 PAEPP09466 180 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 LRCH2Q5VUJ6 765 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 PALB2Q86YC2 1186 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 C3orf20Q8ND61 904 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 SLC5A5Q92911 643 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 MRIQ9BWK5 157 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 TAS2R14Q9NYV8 317 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTSD-201ENST00000236671 PRR12Q9ULL5 1215 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 GMNCA6NCL1 334 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 WNT10BO00744 389 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 TMOD1P28289 359 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 EPHX2P34913 555 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 CYP2J2P51589 502 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 GTF2A1P52655 376 aaPredicted RBP16.81■□□□□ 0.28
CTSD-201ENST00000236671 MYL7Q01449 175 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 PPP2R5AQ15172 486 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 HS2ST1Q7LGA3 356 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 OGFOD1Q8N543 542 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 FMO2Q99518 471 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 RAB17Q9H0T7 212 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 THAP2Q9H0W7 228 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 GPBP1L1Q9HC44 474 aaPredicted RBP16.81■□□□□ 0.28
CTSD-201ENST00000236671 ERVK-5Q9HDB9 667 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 SEL1LQ9UBV2 794 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 NOVA2Q9UNW9 492 aaKnown RBP16.81■□□□□ 0.28
CTSD-201ENST00000236671 COG5Q9UP83 839 aa16.81■□□□□ 0.28
CTSD-201ENST00000236671 NPM3O75607 178 aaKnown RBP16.8■□□□□ 0.28
CTSD-201ENST00000236671 DR1Q01658 176 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 PPARDQ03181 441 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 KIF22Q14807 665 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 KRT71Q3SY84 523 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 SPDYCQ5MJ68 293 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 DUPD1Q68J44 220 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 TRIM31Q9BZY9 425 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 TDRD3Q9H7E2 651 aaKnown RBP16.8■□□□□ 0.28
CTSD-201ENST00000236671 ZDHHC18Q9NUE0 388 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 WRAP73Q9P2S5 460 aaPredicted RBP16.8■□□□□ 0.28
CTSD-201ENST00000236671 HACL1Q9UJ83 578 aa16.8■□□□□ 0.28
CTSD-201ENST00000236671 FRMD4BQ9Y2L6 1034 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms