RNA–Protein interactions for RNA: ENST00000236017.5

APH1A-201, Transcript of aph-1 homolog A, gamma-secretase subunit, humanhuman

TSL 2

Gene APH1A, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APH1A-201ENST00000236017 KCNMB3Q9NPA1 279 aa20.22■□□□□ 0.83
APH1A-201ENST00000236017 VAV3Q9UKW4 847 aa20.22■□□□□ 0.83
APH1A-201ENST00000236017 COL4A3BPQ9Y5P4 624 aa20.22■□□□□ 0.83
APH1A-201ENST00000236017 CCNT1O60563 726 aaKnown RBP20.21■□□□□ 0.83
APH1A-201ENST00000236017 CLASP2O75122 1294 aaKnown RBP20.21■□□□□ 0.83
APH1A-201ENST00000236017 ZC3H11AO75152 810 aaKnown RBP eCLIP20.21■□□□□ 0.83
APH1A-201ENST00000236017 RFC5P40937 340 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 POLGP54098 1239 aaPredicted RBP20.21■□□□□ 0.83
APH1A-201ENST00000236017 NPEPPSP55786 919 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 NHLH1Q02575 133 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 RNASELQ05823 741 aaKnown RBP20.21■□□□□ 0.83
APH1A-201ENST00000236017 ITIH3Q06033 890 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 EPHA7Q15375 998 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 PIK3AP1Q6ZUJ8 805 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 OTUD6AQ7L8S5 288 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 SUGP1Q8IWZ8 645 aaKnown RBP20.21■□□□□ 0.83
APH1A-201ENST00000236017 VPS52Q8N1B4 723 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 WASF1Q92558 559 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 LPPQ93052 612 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 NECTIN4Q96NY8 510 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 INPP5FQ9Y2H2 1132 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 HCFC2Q9Y5Z7 792 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 STK36Q9NRP7 1315 aa20.21■□□□□ 0.83
APH1A-201ENST00000236017 PFKFB2O60825 505 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 OFD1O75665 1012 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 BAG4O95429 457 aaKnown RBP20.2■□□□□ 0.82
APH1A-201ENST00000236017 SIGLEC14Q08ET2 396 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 LONRF3Q496Y0 759 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 SRGAP1Q7Z6B7 1085 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 DDX53Q86TM3 631 aaKnown RBP20.2■□□□□ 0.82
APH1A-201ENST00000236017 C4orf19Q8IY42 314 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 PSPC1Q8WXF1 523 aaKnown RBP20.2■□□□□ 0.82
APH1A-201ENST00000236017 ADAM7Q9H2U9 754 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 DHX33Q9H6R0 707 aaKnown RBP20.2■□□□□ 0.82
APH1A-201ENST00000236017 NRDE2Q9H7Z3 1164 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 IFT122Q9HBG6 1241 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 TBC1D13Q9NVG8 400 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 NR2E1Q9Y466 385 aa20.2■□□□□ 0.82
APH1A-201ENST00000236017 ASAP2O43150 1006 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 GAS2O43903 313 aaKnown RBP20.19■□□□□ 0.82
APH1A-201ENST00000236017 GALTP07902 379 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 SRGAP2CP0DJJ0 459 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 CTSAP10619 480 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 ANKRD1Q15327 319 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 PTPN21Q16825 1174 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 ZBTB33Q86T24 672 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 SLFN12Q8IYM2 578 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 URGCPQ8TCY9 931 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 TCP11Q8WWU5 503 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 PRPF31Q8WWY3 499 aaKnown RBP20.19■□□□□ 0.82
APH1A-201ENST00000236017 HAS1Q92839 578 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 TMEM143Q96AN5 459 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 IGSF21Q96ID5 467 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 PRRX2Q99811 253 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 AGPAT5Q9NUQ2 364 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 TPCN1Q9ULQ1 816 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 PCDHB2Q9Y5E7 798 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 IRAK3Q9Y616 596 aa20.19■□□□□ 0.82
APH1A-201ENST00000236017 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.18■□□□□ 0.82
APH1A-201ENST00000236017 YWHABP31946 246 aaKnown RBP20.18■□□□□ 0.82
APH1A-201ENST00000236017 NCAPH2Q6IBW4 605 aa20.18■□□□□ 0.82
APH1A-201ENST00000236017 ZNF579Q8NAF0 562 aaKnown RBP20.18■□□□□ 0.82
APH1A-201ENST00000236017 LXNQ9BS40 222 aa20.18■□□□□ 0.82
APH1A-201ENST00000236017 ZBP1Q9H171 429 aa20.18■□□□□ 0.82
APH1A-201ENST00000236017 ZSWIM4Q9H7M6 989 aa20.18■□□□□ 0.82
APH1A-201ENST00000236017 DZANK1Q9NVP4 752 aa20.18■□□□□ 0.82
APH1A-201ENST00000236017 KANSL3Q9P2N6 904 aa20.18■□□□□ 0.82
APH1A-201ENST00000236017 ORC3Q9UBD5 711 aaPredicted RBP20.18■□□□□ 0.82
APH1A-201ENST00000236017 STK39Q9UEW8 545 aa20.18■□□□□ 0.82
APH1A-201ENST00000236017 MEIS3P2A8K0S8 358 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 MTHFRP42898 656 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 LAMTOR4Q0VGL1 99 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 XKR9Q5GH70 373 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 MRPL10Q7Z7H8 261 aaKnown RBP20.17■□□□□ 0.82
APH1A-201ENST00000236017 TMEM173Q86WV6 379 aaPredicted RBP20.17■□□□□ 0.82
APH1A-201ENST00000236017 FBXL6Q8N531 539 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 OXER1Q8TDS5 423 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 RIPOR3Q96MK2 946 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 FAM193BQ96PV7 902 aaPredicted RBP20.17■□□□□ 0.82
APH1A-201ENST00000236017 GBP3Q9H0R5 595 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 TSHZ2Q9NRE2 1034 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 GJB4Q9NTQ9 266 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 RGL1Q9NZL6 768 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 WRAP73Q9P2S5 460 aaPredicted RBP20.17■□□□□ 0.82
APH1A-201ENST00000236017 TECTAO75443 2155 aa20.17■□□□□ 0.82
APH1A-201ENST00000236017 ALDH2P05091 517 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 SP100P23497 879 aaPredicted RBP20.16■□□□□ 0.82
APH1A-201ENST00000236017 KRT2P35908 639 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 SLC11A1P49279 550 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 MRE11P49959 708 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 ANAPC15P60006 121 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 ATAT1Q5SQI0 421 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 PPFIBP1Q86W92 1011 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 POTEDQ86YR6 584 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 CNNM3Q8NE01 707 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 DYDC2Q96IM9 177 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 RSAD1Q9HA92 442 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 CNTNAP2Q9UHC6 1331 aa20.16■□□□□ 0.82
APH1A-201ENST00000236017 NCBP1Q09161 790 aaKnown RBP20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms