RNA–Protein interactions for RNA: ENST00000233027.9

NEK4-201, Transcript of NIMA related kinase 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK4, Length 6,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-201ENST00000233027 SNF8Q96H20 258 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 ADAM33Q9BZ11 813 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CYP4F11Q9HBI6 524 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 FBXO2Q9UK22 296 aaPredicted RBP14.26□□□□□ -0.13
NEK4-201ENST00000233027 DENND3A2RUS2 1198 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 GSG1L2A8MUP6 293 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CLDN3O15551 220 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 LDHAP00338 332 aaKnown RBP14.26□□□□□ -0.13
NEK4-201ENST00000233027 TAC1P20366 129 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 BAG6P46379 1132 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 ERFP50548 548 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CCNA1P78396 465 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 E4F1Q66K89 784 aaPredicted RBP14.26□□□□□ -0.13
NEK4-201ENST00000233027 SH2D3CQ8N5H7 860 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 ETNK1Q9HBU6 452 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 TRPM1Q7Z4N2 1603 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 DIAPH2O60879 1101 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 GNA15P30679 374 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CDR2Q01850 454 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 ARMCX2Q7L311 632 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 SPATA4Q8NEY3 305 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CDC42BPGQ6DT37 1551 aa14.26□□□□□ -0.13
NEK4-201ENST00000233027 CHEK2O96017 543 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 COPS2P61201 443 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 SCARF1Q14162 830 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 MDH1BQ5I0G3 518 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 SYCP2LQ5T4T6 812 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 COG1Q8WTW3 980 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 KLHL11Q9NVR0 708 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 ASNSD1Q9NWL6 643 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 LIMA1Q9UHB6 759 aaKnown RBP14.25□□□□□ -0.13
NEK4-201ENST00000233027 CHGBP05060 677 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 CHRNA3P32297 505 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 TRIM59Q8IWR1 403 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 FAM205CA6NFA0 338 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 M0QYV0 167 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 CYP27B1O15528 508 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 MCF2P10911 925 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 RAD23BP54727 409 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 CAV1Q03135 178 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 TMEM35BQ8NCS4 154 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.25□□□□□ -0.131e-6■■□□□ 13.1
NEK4-201ENST00000233027 TTC25Q96NG3 672 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 OSBPL1AQ9BXW6 950 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 SUCLA2Q9P2R7 463 aaPredicted RBP14.25□□□□□ -0.13
NEK4-201ENST00000233027 LRFN2Q9ULH4 789 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 H3BRJ5 948 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 ATP5HO75947 161 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 ANXA13P27216 316 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 ARFIP2P53365 341 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 KRT17Q04695 432 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 C1orf228Q6PIY5 440 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 ARL8AQ96BM9 186 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 TTC1Q99614 292 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 NBPF3Q9H094 633 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 SMARCAL1Q9NZC9 954 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 KRT38O76015 456 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 ATP2C1P98194 919 aaPredicted RBP14.25□□□□□ -0.13
NEK4-201ENST00000233027 ACAD11Q709F0 780 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 AGR3Q8TD06 166 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 NRBF2Q96F24 287 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 CEP19Q96LK0 163 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 COA1Q9GZY4 146 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 ATP8B3O60423 1300 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 PALLDQ8WX93 1383 aa14.25□□□□□ -0.13
NEK4-201ENST00000233027 CFAP69A5D8W1 941 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 GPC3P51654 580 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 FSCBQ5H9T9 825 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 ANKMY2Q8IV38 441 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 RMDN3Q96TC7 470 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 MXD3Q9BW11 206 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 RFX1P22670 979 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 IZUMO3Q5VZ72 239 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 CLEC17AQ6ZS10 378 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 SPDYE1Q8NFV5 336 aaPredicted RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 DHX38Q92620 1227 aaKnown RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 ARHGAP31Q2M1Z3 1444 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 BZW1Q7L1Q6 419 aaKnown RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 FOXP4Q8IVH2 680 aaPredicted RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 TSR3Q9UJK0 312 aaKnown RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 CALB1P05937 261 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 PAMP19021 973 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 ZNF568Q3ZCX4 644 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 CCDC124Q96CT7 223 aaKnown RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 SCHIP1Q9P0W5 487 aaPredicted RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 UTYO14607 1347 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 FOXO4P98177 505 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 EMSYQ7Z589 1322 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 CCNYL1Q8N7R7 359 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 PPP1R36Q96LQ0 422 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 LBHD1Q9BQE6 289 aaPredicted RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 FSD1LQ9BXM9 530 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 WNT8AQ9H1J5 351 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
NEK4-201ENST00000233027 YY1AP1Q9H869 796 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 KLC4Q9NSK0 619 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 L3MBTL1Q9Y468 752 aa14.24□□□□□ -0.13
NEK4-201ENST00000233027 ZBTB24O43167 697 aaPredicted RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 HSPA8P11142 646 aaKnown RBP14.23□□□□□ -0.13
NEK4-201ENST00000233027 AP1B1Q10567 949 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms