RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 ARHGEF3Q9NR81 526 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 CHORDC1Q9UHD1 332 aaPredicted RBP15.2■□□□□ 0.02
SF1-201ENST00000227503 GM2AP17900 193 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 PICALMQ13492 652 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 PLS1Q14651 629 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 SEPT2Q15019 361 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 HYIQ5T013 277 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 TTBK2Q6IQ55 1244 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 NT5DC3Q86UY8 548 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 PHC3Q8NDX5 983 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 RAB17Q9H0T7 212 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 GANQ9H2C0 597 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 DAAM1Q9Y4D1 1078 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 PCDHA2Q9Y5H9 948 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 IGSF9BQ9UPX0 1349 aa15.2■□□□□ 0.02
SF1-201ENST00000227503 CCDC188H7C350 402 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 RFC5P40937 340 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 IFI16Q16666 785 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 EXOC3L1Q86VI1 746 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 EIF1ADQ8N9N8 165 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 DDX23Q9BUQ8 820 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 NSRP1Q9H0G5 558 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 SLITRK6Q9H5Y7 841 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 PTPN22Q9Y2R2 807 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 CCDC169A6NNP5 214 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 ANKRD63C9JTQ0 380 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 TTLL1O95922 423 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 OAS1P00973 400 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 FESP07332 822 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 PDE6CP51160 858 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 EIF3BP55884 814 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 FAM26FQ5R3K3 315 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 CWF19L1Q69YN2 538 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 SUPT20HQ8NEM7 779 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 UCMAQ8WVF2 138 aa15.19■□□□□ 0.02
SF1-201ENST00000227503 SYN2Q92777 582 aaPredicted RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 DDX4Q9NQI0 724 aaKnown RBP15.19■□□□□ 0.02
SF1-201ENST00000227503 TMEM120BA0PK00 339 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 ACSL3O95573 720 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 KCNH2Q12809 1159 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 ADAM9Q13443 819 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 AUHQ13825 339 aaKnown RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 TTC8Q8TAM2 541 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 PGM2Q96G03 612 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 ERP44Q9BS26 406 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 TARSP26639 723 aaKnown RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 POLE2P56282 527 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 DUPD1Q68J44 220 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 JAMLQ86YT9 394 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 BORCS6Q96GS4 357 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 C8orf37Q96NL8 207 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 PCDHA12Q9UN75 941 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 ATF5Q9Y2D1 282 aaPredicted RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 LY75O60449 1722 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 RASGRF2O14827 1237 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 AHCYL1O43865 530 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 HIP1RO75146 1068 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 SUN1O94901 812 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 RPL21P46778 160 aaKnown RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 MARSP56192 900 aaKnown RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 MPP2Q14168 576 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 DCAF17Q5H9S7 520 aaPredicted RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 CGB2Q6NT52 195 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 TMEM154Q6P9G4 183 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 SEC14L1Q92503 715 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 RBM17Q96I25 401 aaKnown RBP15.18■□□□□ 0.02
SF1-201ENST00000227503 NGLY1Q96IV0 654 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 CEP63Q96MT8 703 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 AIPL1Q9NZN9 384 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 TBK1Q9UHD2 729 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 STXBP5LQ9Y2K9 1186 aa15.18■□□□□ 0.02
SF1-201ENST00000227503 E9PMD0 336 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 BBOX1O75936 387 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 NUDT17P0C025 328 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 SLC16A2P36021 539 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 GTF2IP78347 998 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 ASRGL1Q7L266 308 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 SPATA21Q7Z572 469 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 TRIM59Q8IWR1 403 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 RASGEF1CQ8N431 466 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 POP1Q99575 1024 aaKnown RBP15.17■□□□□ 0.02
SF1-201ENST00000227503 NUCKS1Q9H1E3 243 aaKnown RBP15.17■□□□□ 0.02
SF1-201ENST00000227503 DLGAP2Q9P1A6 1054 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 SRCAPQ6ZRS2 3230 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 TMEM110-MUSTN1A8MSY1 372 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 USP17L10C9JJH3 530 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 ZBTB5O15062 677 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 KIAA0391O15091 583 aaKnown RBP15.17■□□□□ 0.02
SF1-201ENST00000227503 SHMT1P34896 483 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 MARCKSL1P49006 195 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 USP4Q13107 963 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 KIAA1755Q5JYT7 1200 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 TCERG1LQ5VWI1 586 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 ZNF449Q6P9G9 518 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 PSTPIP2Q9H939 334 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 HAO1Q9UJM8 370 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 C10orf71Q711Q0 1435 aa15.17■□□□□ 0.02
SF1-201ENST00000227503 LRRD1A4D1F6 860 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms