RNA–Protein interactions for RNA: ENST00000226798.8

FRG1-201, Transcript of FSHD region gene 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FRG1, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRG1-201ENST00000226798 BMS1Q14692 1282 aaKnown RBP13.05□□□□□ -0.32
FRG1-201ENST00000226798 ATAT1Q5SQI0 421 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 CWF19L1Q69YN2 538 aaKnown RBP13.05□□□□□ -0.32
FRG1-201ENST00000226798 DDX53Q86TM3 631 aaKnown RBP13.05□□□□□ -0.32
FRG1-201ENST00000226798 FEZF2Q8TBJ5 459 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 CCDC12Q8WUD4 166 aaPredicted RBP13.05□□□□□ -0.32
FRG1-201ENST00000226798 NLRP7Q8WX94 980 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 IGSF21Q96ID5 467 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 YTHDC1Q96MU7 727 aaKnown RBP13.05□□□□□ -0.32
FRG1-201ENST00000226798 SCLT1Q96NL6 688 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 CEP89Q96ST8 783 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 RIT2Q99578 217 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 VN1R3Q9BXE9 311 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 CHST12Q9NRB3 414 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 NRBP2Q9NSY0 501 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 TBC1D13Q9NVG8 400 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 LIMD1Q9UGP4 676 aa13.05□□□□□ -0.32
FRG1-201ENST00000226798 DBR1Q9UK59 544 aaKnown RBP13.05□□□□□ -0.32
FRG1-201ENST00000226798 IGKV6-21A0A0C4DH24 114 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 GNA11P29992 359 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 SFNP31947 248 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 CA8P35219 290 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 PTPN14Q15678 1187 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 SLC5A5Q92911 643 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 LPPQ93052 612 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 GCOM2Q9BZD3 368 aaPredicted RBP13.04□□□□□ -0.32
FRG1-201ENST00000226798 UNC45AQ9H3U1 944 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 NRDE2Q9H7Z3 1164 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 DOCK8Q8NF50 2099 aa13.04□□□□□ -0.32
FRG1-201ENST00000226798 CEP250Q9BV73 2442 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 CCDC196A0A1B0GTZ2 297 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 MEIS3P2A8K0S8 358 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 PRPF3O43395 683 aaKnown RBP13.03□□□□□ -0.32
FRG1-201ENST00000226798 CHMP2AO43633 222 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 B4GALT3O60512 393 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 GAS7O60861 476 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 STBD1O95210 358 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 GALTP07902 379 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 SFPQP23246 707 aaKnown RBP eCLIP13.03□□□□□ -0.32
FRG1-201ENST00000226798 PSEN1P49768 467 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 JAK3P52333 1124 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 CDC42EP1Q00587 391 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 KRT32Q14532 448 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 GLB1LQ6UWU2 654 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 TMC5Q6UXY8 1006 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 FRMD5Q7Z6J6 570 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 GPR149Q86SP6 731 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 NIFKQ9BYG3 293 aaKnown RBP13.03□□□□□ -0.32
FRG1-201ENST00000226798 MFSD1Q9H3U5 465 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 SFXN1Q9H9B4 322 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 CYP26B1Q9NR63 512 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
FRG1-201ENST00000226798 PIN4Q9Y237 131 aaKnown RBP13.03□□□□□ -0.32
FRG1-201ENST00000226798 OTOGLQ3ZCN5 2332 aa13.02□□□□□ -0.32
FRG1-201ENST00000226798 ARID2Q68CP9 1835 aa13.02□□□□□ -0.32
FRG1-201ENST00000226798 A0A087WZ62 844 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 TMEM150BA6NC51 233 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 ZNF623O75123 536 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 PSMD10O75832 226 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 HMGB1P09429 215 aaKnown RBP13.02□□□□□ -0.33
FRG1-201ENST00000226798 SKIP12755 728 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 NPR3P17342 541 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 AOC1P19801 751 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 SLC11A1P49279 550 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 RAB27AP51159 221 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 NOMO2Q5JPE7 1267 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 LRCH2Q5VUJ6 765 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 TWF2Q6IBS0 349 aaKnown RBP13.02□□□□□ -0.33
FRG1-201ENST00000226798 B3GNT9Q6UX72 402 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 CCDC149Q6ZUS6 474 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 CABP7Q86V35 215 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 ZNF410Q86VK4 478 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 RDM1Q8NG50 284 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 BICD2Q8TD16 824 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 NKD2Q969F2 451 aaPredicted RBP13.02□□□□□ -0.33
FRG1-201ENST00000226798 GJA10Q969M2 543 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 CCDC136Q96JN2 1154 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 FDXACB1Q9BRP7 624 aaPredicted RBP13.02□□□□□ -0.33
FRG1-201ENST00000226798 FAM105AQ9NUU6 356 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 SEPT9Q9UHD8 586 aaPredicted RBP13.02□□□□□ -0.33
FRG1-201ENST00000226798 DUSP12Q9UNI6 340 aa13.02□□□□□ -0.33
FRG1-201ENST00000226798 LILRB3O75022 631 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 OFD1O75665 1012 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 USP11P51784 963 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 CLCN4P51793 760 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 TDGQ13569 410 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 NTRK3Q16288 839 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 LONRF3Q496Y0 759 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 MTERF2Q49AM1 385 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 XKR3Q5GH77 459 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 OTOP3Q7RTS5 596 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 CCDC105Q8IYK2 499 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 TMEM87AQ8NBN3 555 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 FLCNQ8NFG4 579 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 CCDC148Q8NFR7 591 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 PHKBQ93100 1093 aa13.01□□□□□ -0.33
FRG1-201ENST00000226798 ACSF2Q96CM8 615 aaPredicted RBP13.01□□□□□ -0.33
FRG1-201ENST00000226798 TEKT3Q9BXF9 490 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms