RNA–Protein interactions for RNA: ENST00000226218.8

VTN-201, Transcript of vitronectin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTN, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-201ENST00000226218 MTRF1LQ9UGC7 380 aaKnown RBP16.69■□□□□ 0.26
VTN-201ENST00000226218 ALG6Q9Y672 507 aa16.69■□□□□ 0.26
VTN-201ENST00000226218 GAKO14976 1311 aa16.69■□□□□ 0.26
VTN-201ENST00000226218 NRAPQ86VF7 1730 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 MIF4GDA9UHW6 222 aaKnown RBP16.68■□□□□ 0.26
VTN-201ENST00000226218 IGF2BP3O00425 579 aaKnown RBP eCLIP16.68■□□□□ 0.26
VTN-201ENST00000226218 RASGRF2O14827 1237 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 FMO5P49326 533 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 ASRGL1Q7L266 308 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 TAOK1Q7L7X3 1001 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 ZNF804AQ7Z570 1209 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 ANO3Q9BYT9 981 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 PRKAG3Q9UGI9 489 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 RTCBQ9Y3I0 505 aaKnown RBP16.68■□□□□ 0.26
VTN-201ENST00000226218 PCDHB13Q9Y5F0 798 aa16.68■□□□□ 0.26
VTN-201ENST00000226218 USP17L10C9JJH3 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 ANKRD63C9JTQ0 380 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 NEBLO76041 1014 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 GGPS1O95749 300 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 MYCNP04198 464 aaPredicted RBP16.67■□□□□ 0.26
VTN-201ENST00000226218 KRT13P13646 458 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 CCND1P24385 295 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 MARCKSL1P49006 195 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 SATB1Q01826 763 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 GRIK3Q13003 919 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 KIF22Q14807 665 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 DDB1Q16531 1140 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 VSTM1Q6UX27 236 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 RHOT2Q8IXI1 618 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 CCDC24Q8N4L8 307 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 GBP7Q8N8V2 638 aaPredicted RBP16.67■□□□□ 0.26
VTN-201ENST00000226218 KRT35Q92764 455 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 OLFML3Q9NRN5 406 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 SLC5A4Q9NY91 659 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 DBR1Q9UK59 544 aaKnown RBP16.67■□□□□ 0.26
VTN-201ENST00000226218 DNM3Q9UQ16 869 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 PFASO15067 1338 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L15C9J2P7 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L13C9JLJ4 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L11C9JVI0 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L18D6R9N7 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L22D6RA61 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L17D6RBQ6 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L19D6RCP7 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L20D6RJB6 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 PPP1R12AO14974 1030 aaPredicted RBP16.67■□□□□ 0.26
VTN-201ENST00000226218 SLCO1A2P46721 670 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 PEX5P50542 639 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 COPS2P61201 443 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L24Q0WX57 530 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 USP17L6PQ6QN14 398 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 CYFIP1Q7L576 1253 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 NBPF5PQ86XG9 351 aaPredicted RBP16.67■□□□□ 0.26
VTN-201ENST00000226218 UHMK1Q8TAS1 419 aaKnown RBP16.67■□□□□ 0.26
VTN-201ENST00000226218 LENG9Q96B70 501 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 ZSWIM1Q9BR11 485 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 MKNK1Q9BUB5 465 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 FGFR1OP2Q9NVK5 253 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 CD2APQ9Y5K6 639 aa16.67■□□□□ 0.26
VTN-201ENST00000226218 CNTNAP4Q9C0A0 1308 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 UBAP1LF5GYI3 381 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 O00370 1275 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 MEIS1O00470 390 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 KRT16P08779 473 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 PSMC2P35998 433 aaKnown RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 CCNG1P51959 295 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 EIF6P56537 245 aaKnown RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 MKRN4PQ13434 485 aaPredicted RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 CTTNQ14247 550 aaKnown RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 SIX1Q15475 284 aaPredicted RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 CCDC137Q6PK04 289 aaKnown RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 FAM186BQ8IYM0 893 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 RUNDC3BQ96NL0 473 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 P2RX7Q99572 595 aaKnown RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 RUSC1Q9BVN2 902 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 HOMER3Q9NSC5 361 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 RBBP6Q7Z6E9 1792 aaKnown RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 TBX3O15119 743 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 TP73O15350 636 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 EIF3DO15371 548 aaKnown RBP eCLIP16.66■□□□□ 0.26
VTN-201ENST00000226218 GCNT3O95395 438 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 TTLL1O95922 423 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 POLD1P28340 1107 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 SLC15A2Q16348 729 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 CBWD6Q4V339 395 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 CCDC38Q502W7 563 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 CBWD3Q5JTY5 395 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 CBWD5Q5RIA9 395 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 CDCA2Q69YH5 1023 aaPredicted RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 DPP8Q6V1X1 898 aaPredicted RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 SMIM5Q71RC9 77 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 PRCCQ92733 491 aaPredicted RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 CD101Q93033 1021 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 GPR101Q96P66 508 aaPredicted RBP16.66■□□□□ 0.26
VTN-201ENST00000226218 SETDB2Q96T68 719 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 GLT8D2Q9H1C3 349 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 AAASQ9NRG9 546 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 ANKIB1Q9P2G1 1089 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 NARFQ9UHQ1 456 aa16.66■□□□□ 0.26
VTN-201ENST00000226218 GGT7Q9UJ14 662 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms