RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 MAFO75444 373 aaPredicted RBP16.25■□□□□ 0.19
CCDC47-201ENST00000225726 PON1P27169 355 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 NAMPTP43490 491 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 SYT10Q6XYQ8 523 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 EXOC8Q8IYI6 725 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 ASAP3Q8TDY4 903 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 ATP8B4Q8TF62 1192 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 FMO5P49326 533 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 LAMC2Q13753 1193 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 RGMBQ6NW40 437 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 TSC1Q92574 1164 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 KATNBL1Q9H079 304 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 SMARCAD1Q9H4L7 1026 aa16.25■□□□□ 0.19
CCDC47-201ENST00000225726 ANKRD63C9JTQ0 380 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 GH1P01241 217 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 GLRA2P23416 452 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 ARHGAP1Q07960 439 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 MYRIPQ8NFW9 859 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 MAML3Q96JK9 1138 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 NLRC4Q9NPP4 1024 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 GCNT4Q9P109 453 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 EIF3CLB5ME19 914 aaKnown RBP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 IGF2BP3O00425 579 aaKnown RBP eCLIP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 SLC9A1P19634 815 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 KRT83P78385 493 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 CBX1P83916 185 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 PLCB4Q15147 1175 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 KLHDC7AQ5VTJ3 777 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 SFMBT2Q5VUG0 894 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 SAPCD2Q86UD0 394 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 EIF3CQ99613 913 aaKnown RBP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 FBXL5Q9UKA1 691 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 GAS2O43903 313 aaKnown RBP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 CNGA1P29973 690 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 MCCD1P59942 119 aaPredicted RBP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 BRDTQ58F21 947 aaPredicted RBP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 TMEM63BQ5T3F8 832 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 TAS1R3Q7RTX0 852 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 EMID1Q96A84 441 aaPredicted RBP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 SLC5A4Q9NY91 659 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 CPA4Q9UI42 421 aa16.24■□□□□ 0.19
CCDC47-201ENST00000225726 REXO2Q9Y3B8 237 aaKnown RBP16.24■□□□□ 0.19
CCDC47-201ENST00000225726 SNAI1O95863 264 aaPredicted RBP16.23■□□□□ 0.19
CCDC47-201ENST00000225726 SLC10A3P09131 477 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 TRIM50Q86XT4 487 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 RDH13Q8NBN7 331 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 ARHGAP20Q9P2F6 1191 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 ACTN1P12814 892 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 MARK3P27448 753 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 ADSSP30520 456 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 VAMP7P51809 220 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 APBA1Q02410 837 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 SLC39A4Q6P5W5 647 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 DEPTORQ8TB45 409 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 CCDC42Q96M95 316 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 SIX2Q9NPC8 291 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 MYO6Q9UM54 1294 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 PASKQ96RG2 1323 aa16.23■□□□□ 0.19
CCDC47-201ENST00000225726 RIOK3O14730 519 aaKnown RBP16.22■□□□□ 0.19
CCDC47-201ENST00000225726 N4BP1O75113 896 aaKnown RBP16.22■□□□□ 0.19
CCDC47-201ENST00000225726 TRIM49P0CI25 452 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 TRIM49CP0CI26 452 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 GARTP22102 1010 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
CCDC47-201ENST00000225726 MSL3Q8N5Y2 521 aaKnown RBP16.22■□□□□ 0.19
CCDC47-201ENST00000225726 LZTFL1Q9NQ48 299 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 UCHL3P15374 230 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 MYL7Q01449 175 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 STRN3Q13033 797 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 TCP11Q8WWU5 503 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 ZBTB9Q96C00 473 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 DNAI1Q9UI46 699 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 DAAM1Q9Y4D1 1078 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 IPO7O95373 1038 aaKnown RBP16.22■□□□□ 0.19
CCDC47-201ENST00000225726 ARHGAP29Q52LW3 1261 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 IER5Q5VY09 327 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 PPTC7Q8NI37 304 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 BICD1Q96G01 975 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 JPH2Q9BR39 696 aaPredicted RBP16.22■□□□□ 0.19
CCDC47-201ENST00000225726 TINF2Q9BSI4 451 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 AIPL1Q9NZN9 384 aa16.22■□□□□ 0.19
CCDC47-201ENST00000225726 UQCRHLA0A096LP55 91 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 SSU72P8A0A1W2PR75 194 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 LRRIQ4A6NIV6 560 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 ZBTB42B2RXF5 422 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 HNRNPDLO14979 420 aaKnown RBP16.21■□□□□ 0.19
CCDC47-201ENST00000225726 HBP1O60381 514 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 SERPING1P05155 500 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 UQCRHP07919 91 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 INHBEP58166 350 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 CBWD6Q4V339 395 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 CBWD3Q5JTY5 395 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 CBWD5Q5RIA9 395 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 ZNF662Q6ZS27 426 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 TMEM134Q9H6X4 195 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 IGKV6-21A0A0C4DH24 114 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 A0A0U1RQJ8 604 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 P4HA2O15460 535 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 PIGRP01833 764 aa16.21■□□□□ 0.19
CCDC47-201ENST00000225726 EIF4A3P38919 411 aaKnown RBP16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms