RNA–Protein interactions for RNA: ENST00000221922.10

CCDC9-201, Transcript of coiled-coil domain containing 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC9, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-201ENST00000221922 IFT81Q8WYA0 676 aa24.11■■□□□ 1.45
CCDC9-201ENST00000221922 PBKQ96KB5 322 aa24.11■■□□□ 1.45
CCDC9-201ENST00000221922 CCDC43Q96MW1 224 aaKnown RBP24.11■■□□□ 1.45
CCDC9-201ENST00000221922 RMDN3Q96TC7 470 aa24.11■■□□□ 1.45
CCDC9-201ENST00000221922 TMEM206Q9H813 350 aa24.11■■□□□ 1.45
CCDC9-201ENST00000221922 GPRC5DQ9NZD1 345 aa24.11■■□□□ 1.45
CCDC9-201ENST00000221922 INTUQ9ULD6 942 aa24.11■■□□□ 1.45
CCDC9-201ENST00000221922 C19orf81C9J6K1 198 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 KIF4AO95239 1232 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 EMC10Q5UCC4 262 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 KSR1Q8IVT5 923 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 DAW1Q8N136 415 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 TRPM4Q8TD43 1214 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 PIK3R5Q8WYR1 880 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 RNF146Q9NTX7 359 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 ADAMTS5Q9UNA0 930 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 ZHX2Q9Y6X8 837 aa24.1■■□□□ 1.45
CCDC9-201ENST00000221922 DICER1Q9UPY3 1922 aaKnown RBP24.1■■□□□ 1.45
CCDC9-201ENST00000221922 K7ENM7 598 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 QARSP47897 775 aaKnown RBP24.09■■□□□ 1.45
CCDC9-201ENST00000221922 GNGT1P63211 74 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 C1orf131Q8NDD1 294 aaKnown RBP24.09■■□□□ 1.45
CCDC9-201ENST00000221922 ACTRT1Q8TDG2 376 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 SCFD2Q8WU76 684 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 TIPINQ9BVW5 301 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 STK33Q9BYT3 514 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 IKZF4Q9H2S9 585 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 ZNF233A6NK53 670 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 RAD51CO43502 376 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 CCDC172P0C7W6 258 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 ZBTB48P10074 688 aaPredicted RBP24.09■■□□□ 1.45
CCDC9-201ENST00000221922 TMEM174Q8WUU8 243 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 WNK4Q96J92 1243 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 AJAP1Q9UKB5 411 aaPredicted RBP24.09■■□□□ 1.45
CCDC9-201ENST00000221922 SAMM50Q9Y512 469 aa24.09■■□□□ 1.45
CCDC9-201ENST00000221922 KCNK3O14649 394 aa24.08■■□□□ 1.45
CCDC9-201ENST00000221922 EXOC3O60645 756 aa24.08■■□□□ 1.45
CCDC9-201ENST00000221922 SOX5P35711 763 aa24.08■■□□□ 1.45
CCDC9-201ENST00000221922 NSMFQ6X4W1 530 aa24.08■■□□□ 1.45
CCDC9-201ENST00000221922 KLRG1Q96E93 195 aa24.08■■□□□ 1.45
CCDC9-201ENST00000221922 SSC5DA1L4H1 1573 aa24.08■■□□□ 1.44
CCDC9-201ENST00000221922 A0A0A6YYK5 440 aaPredicted RBP24.07■■□□□ 1.44
CCDC9-201ENST00000221922 KRT14P02533 472 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 H2AFZP0C0S5 128 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 RFX1P22670 979 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 DSG3P32926 999 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 RARRES1P49788 294 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 BFSP1Q12934 665 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 NOL9Q5SY16 702 aaKnown RBP24.07■■□□□ 1.44
CCDC9-201ENST00000221922 ARHGEF16Q5VV41 709 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 H2AFVQ71UI9 128 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 NLGN2Q8NFZ4 835 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 ACCSQ96QU6 501 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 FAM107BQ9H098 131 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 RIPK3Q9Y572 518 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 BHMG1C9JSJ3 638 aaPredicted RBP24.07■■□□□ 1.44
CCDC9-201ENST00000221922 F8VZ95 297 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 MYCLP12524 364 aaPredicted RBP24.07■■□□□ 1.44
CCDC9-201ENST00000221922 KRT13P13646 458 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 HSPA9P38646 679 aaKnown RBP24.07■■□□□ 1.44
CCDC9-201ENST00000221922 JAK3P52333 1124 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 HMGCS2P54868 508 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 MYL7Q01449 175 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 PRAMEF18Q5VWM3 479 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 GJB7Q6PEY0 223 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 GPC2Q8N158 579 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 BCAS4Q8TDM0 211 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 LMBR1Q8WVP7 490 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 CALR3Q96L12 384 aaKnown RBP24.07■■□□□ 1.44
CCDC9-201ENST00000221922 ISCUQ9H1K1 167 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 GGA3Q9NZ52 723 aa24.07■■□□□ 1.44
CCDC9-201ENST00000221922 ATP2A1O14983 1001 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 PLS3P13797 630 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 SFNP31947 248 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 RNASE9P60153 205 aaKnown RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 SLFN11Q7Z7L1 901 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 C12orf56Q8IXR9 622 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 TPCN2Q8NHX9 752 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 INTS2Q9H0H0 1204 aaKnown RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 TAF1DQ9H5J8 278 aaPredicted RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 DNAJC12Q9UKB3 198 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 EVI5O60447 810 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 LMNB1P20700 586 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 NOP2P46087 812 aaKnown RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 CCT5P48643 541 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 GUCY2FP51841 1108 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 SNRPFP62306 86 aaKnown RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 KRT76Q01546 638 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 BAATQ14032 418 aaPredicted RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 TRADDQ15628 312 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 KDM7AQ6ZMT4 941 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 INTS8Q75QN2 995 aaKnown RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 C4orf19Q8IY42 314 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 EFCAB13Q8IY85 973 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 MAF1Q9H063 256 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 APEX2Q9UBZ4 518 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 TCEAL9Q9UHQ7 104 aa24.06■■□□□ 1.44
CCDC9-201ENST00000221922 ZNF214Q9UL59 606 aaPredicted RBP24.06■■□□□ 1.44
CCDC9-201ENST00000221922 EBAG9O00559 213 aa24.05■■□□□ 1.44
CCDC9-201ENST00000221922 CCND2P30279 289 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms