RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 USP17L15C9J2P7 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L13C9JLJ4 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L11C9JVI0 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L18D6R9N7 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L22D6RA61 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L17D6RBQ6 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L19D6RCP7 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L20D6RJB6 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 IPO5O00410 1097 aaKnown RBP11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L24Q0WX57 530 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 USP17L6PQ6QN14 398 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 PDIK1LQ8N165 341 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 RAB42Q8N4Z0 105 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 IP6K2Q9UHH9 426 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 A0A0G2JND7 137 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 VSTM4Q8IW00 320 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 SAAL1Q96ER3 474 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 PANX2Q96RD6 677 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 CPVLQ9H3G5 476 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 PCSK1NQ9UHG2 260 aa11.82□□□□□ -0.52
KNOP1-201ENST00000219837 ROBO2Q9HCK4 1378 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 KPNA7A9QM74 516 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 GPC5P78333 572 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 BTBD8Q5XKL5 378 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 ANKS3Q6ZW76 656 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 KDELC2Q7Z4H8 507 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 TBC1D10CQ8IV04 446 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 HIPK4Q8NE63 616 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 MCPH1Q8NEM0 835 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 SLC26A7Q8TE54 656 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 POLD4Q9HCU8 107 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 MINPP1Q9UNW1 487 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 LARGE1O95461 756 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 SMARCA1P28370 1054 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 MRPS25P82663 173 aaKnown RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 VEPH1Q14D04 833 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 PFKFB3Q16875 520 aaPredicted RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 EFHC2Q5JST6 749 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 EPAS1Q99814 870 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 DDX50Q9BQ39 737 aaKnown RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 TSSK1BQ9BXA7 367 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 RPAP1Q9BWH6 1393 aaPredicted RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 A8MXQ7 604 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 CTIFO43310 598 aaKnown RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 TBXAS1P24557 533 aaPredicted RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 PEX19P40855 299 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 RESTQ13127 1097 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 SYTL3Q4VX76 610 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 TTC23LQ6PF05 361 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 TTLL11Q8NHH1 800 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 TRIM55Q9BYV6 548 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 E2F5Q15329 346 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 THEMIS2Q5TEJ8 643 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 PPP1R18Q6NYC8 613 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 ZFYVE19Q96K21 471 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 NFU1Q9UMS0 254 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 MAP3K4Q9Y6R4 1608 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 UTYO14607 1347 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 SERPIND1P05546 499 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 SFNP31947 248 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 GTF2H3Q13889 308 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 ARL6IP4Q66PJ3 421 aaKnown RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 RGS9BPQ6ZS82 235 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 EPM2AIP1Q7L775 607 aaPredicted RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 ZNF564Q8TBZ8 553 aaPredicted RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 UBE2Q2Q8WVN8 375 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 STX18Q9P2W9 335 aaKnown RBP11.81□□□□□ -0.52
KNOP1-201ENST00000219837 SEL1LQ9UBV2 794 aa11.81□□□□□ -0.52
KNOP1-201ENST00000219837 ZC3H4Q9UPT8 1303 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 MYO1DO94832 1006 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 KCNJ6P48051 423 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 PSMC1P62191 440 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 FSCBQ5H9T9 825 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 ZC3H12BQ5HYM0 836 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 GPD1LQ8N335 351 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 CEP95Q96GE4 821 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 TMEM47Q9BQJ4 181 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 ACAD9Q9H845 621 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 POTEB3A0JP26 581 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 POTECB2RU33 542 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 PYGBP11216 843 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 KRT76Q01546 638 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 TMED1Q13445 227 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 CUL1Q13616 776 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 POTEBQ6S5H4 581 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 ARHGEF1Q92888 912 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 LBHD1Q9BQE6 289 aaPredicted RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 KIFC3Q9BVG8 833 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 SIK2Q9H0K1 926 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 APOL1O14791 398 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 ASMTLO95671 621 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 IFNAR1P17181 557 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 EN1Q05925 392 aaPredicted RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 FLOT2Q14254 428 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 HEATR6Q6AI08 1181 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 DDIASQ8IXT1 998 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 OTULINQ96BN8 352 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 NPHP3-ACAD11A0A0J9YXS1 232 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 EFTUD2Q15029 972 aaKnown RBP eCLIP11.8□□□□□ -0.523e-6■■■■■ 41.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms