RNA–Protein interactions for RNA: ENST00000219302.7

NME3-201, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME3, Length 1,069 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-201ENST00000219302 NOMO2Q5JPE7 1267 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 TWF2Q6IBS0 349 aaKnown RBP17.7■□□□□ 0.42
NME3-201ENST00000219302 ZBTB33Q86T24 672 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 UBALD2Q8IYN6 164 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 BLIDQ8IZY5 108 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 DAGLBQ8NCG7 672 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 FEZF2Q8TBJ5 459 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 IFT122Q9HBG6 1241 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 ZSWIM6Q9HCJ5 1215 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 SORCS3Q9UPU3 1222 aa17.7■□□□□ 0.42
NME3-201ENST00000219302 ZFHX2Q9C0A1 2572 aaPredicted RBP17.7■□□□□ 0.42
NME3-201ENST00000219302 CARNS1A5YM72 827 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 EML1O00423 815 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 B4GALT3O60512 393 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 EPCAMP16422 314 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 NUBP1P53384 320 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 PSMC5P62195 406 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 MTMR3Q13615 1198 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 GIT2Q14161 759 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 RARS2Q5T160 578 aaKnown RBP17.69■□□□□ 0.42
NME3-201ENST00000219302 GLB1LQ6UWU2 654 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 RUFY3Q7L099 469 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 RHPN2Q8IUC4 686 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 TRIM22Q8IYM9 498 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 ZDHHC14Q8IZN3 488 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 VN1R3Q9BXE9 311 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 FAM86C1Q9NVL1 165 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 DNAJB4Q9UDY4 337 aa17.69■□□□□ 0.42
NME3-201ENST00000219302 PIN4Q9Y237 131 aaKnown RBP17.69■□□□□ 0.42
NME3-201ENST00000219302 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.68■□□□□ 0.42
NME3-201ENST00000219302 ST18O60284 1047 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 PTPRZ1P23471 2315 aaPredicted RBP17.68■□□□□ 0.42
NME3-201ENST00000219302 SLC11A1P49279 550 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 ATAT1Q5SQI0 421 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 KIAA1841Q6NSI8 718 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 MRPL10Q7Z7H8 261 aaKnown RBP17.68■□□□□ 0.42
NME3-201ENST00000219302 ZNF280BQ86YH2 543 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 FAM177A1Q8N128 213 aaPredicted RBP17.68■□□□□ 0.42
NME3-201ENST00000219302 ZNF579Q8NAF0 562 aaKnown RBP17.68■□□□□ 0.42
NME3-201ENST00000219302 ZNF274Q96GC6 653 aaPredicted RBP17.68■□□□□ 0.42
NME3-201ENST00000219302 AIFM3Q96NN9 605 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 IRF2BPLQ9H1B7 796 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 SMOC2Q9H3U7 446 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 DZANK1Q9NVP4 752 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 LIMD1Q9UGP4 676 aa17.68■□□□□ 0.42
NME3-201ENST00000219302 DEXIO95424 95 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 CA8P35219 290 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 RAB27AP51159 221 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 AFF1P51825 1210 aaKnown RBP17.67■□□□□ 0.42
NME3-201ENST00000219302 NPEPPSP55786 919 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 NONOQ15233 471 aaKnown RBP eCLIP17.67■□□□□ 0.42
NME3-201ENST00000219302 PLA2G4FQ68DD2 849 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 GALNT17Q6IS24 598 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 AGMOQ6ZNB7 445 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 CATSPER4Q7RTX7 472 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 NLRP4Q96MN2 994 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 JPH2Q9BR39 696 aaPredicted RBP17.67■□□□□ 0.42
NME3-201ENST00000219302 CYP26B1Q9NR63 512 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 AGPAT5Q9NUQ2 364 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 DDX25Q9UHL0 483 aaKnown RBP17.67■□□□□ 0.42
NME3-201ENST00000219302 VAV3Q9UKW4 847 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 USTQ9Y2C2 406 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 INPP5FQ9Y2H2 1132 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 PCDHB2Q9Y5E7 798 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 CFAP54Q96N23 3096 aa17.67■□□□□ 0.42
NME3-201ENST00000219302 H0Y858 1186 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 GALR2O43603 387 aaPredicted RBP17.66■□□□□ 0.42
NME3-201ENST00000219302 SLC37A4O43826 429 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 LILRB3O75022 631 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 DDHD2O94830 711 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 REC8O95072 547 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 ASGR2P07307 311 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 HOXA11P31270 313 aaPredicted RBP17.66■□□□□ 0.42
NME3-201ENST00000219302 QARSP47897 775 aaKnown RBP17.66■□□□□ 0.42
NME3-201ENST00000219302 PPP2R5CQ13362 524 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 PTPN14Q15678 1187 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 INF2Q27J81 1249 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 UBXN11Q5T124 520 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 PLCD3Q8N3E9 789 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 TMEM105Q8N8V8 129 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 ATOH1Q92858 354 aaPredicted RBP17.66■□□□□ 0.42
NME3-201ENST00000219302 PGBD4Q96DM1 585 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 LARP6Q9BRS8 491 aaKnown RBP17.66■□□□□ 0.42
NME3-201ENST00000219302 DHX33Q9H6R0 707 aaKnown RBP17.66■□□□□ 0.42
NME3-201ENST00000219302 MINDY3Q9H8M7 445 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 KCNMB3Q9NPA1 279 aa17.66■□□□□ 0.42
NME3-201ENST00000219302 WRAP73Q9P2S5 460 aaPredicted RBP17.66■□□□□ 0.42
NME3-201ENST00000219302 RNASELQ05823 741 aaKnown RBP17.65■□□□□ 0.42
NME3-201ENST00000219302 TMC5Q6UXY8 1006 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 SRGAP1Q7Z6B7 1085 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 GPR149Q86SP6 731 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 PPFIBP1Q86W92 1011 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 TDRD5Q8NAT2 981 aaKnown RBP17.65■□□□□ 0.42
NME3-201ENST00000219302 TMEM87AQ8NBN3 555 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 PRPF31Q8WWY3 499 aaKnown RBP17.65■□□□□ 0.42
NME3-201ENST00000219302 FAM20AQ96MK3 541 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 KLHL5Q96PQ7 755 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 GBP3Q9H0R5 595 aa17.65■□□□□ 0.42
NME3-201ENST00000219302 DBR1Q9UK59 544 aaKnown RBP17.65■□□□□ 0.42
NME3-201ENST00000219302 COL4A3BPQ9Y5P4 624 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms