RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 SPICE1Q8N0Z3 855 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 TTLL6Q8N841 843 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 RDH13Q8NBN7 331 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 APEX2Q9UBZ4 518 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 COG5Q9UP83 839 aa18.7■□□□□ 0.58
USB1-201ENST00000219281 FRMPD4Q14CM0 1322 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 LRRN2O75325 713 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 PPFIA2O75334 1257 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 RAD17O75943 681 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 MYL7Q01449 175 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 ACTN3Q08043 901 aaPredicted RBP18.69■□□□□ 0.58
USB1-201ENST00000219281 PHLDB3Q6NSJ2 640 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 GLG1Q92896 1179 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 CARD9Q9H257 536 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 DAAM1Q9Y4D1 1078 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 PSMD10O75832 226 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 GH2P01242 217 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 CCDC172P0C7W6 258 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 USP8P40818 1118 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 UBXN2AP68543 259 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 DUPD1Q68J44 220 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 AADACL2Q6P093 401 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 KCTD17Q8N5Z5 321 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 CABS1Q96KC9 395 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 GMLQ99445 158 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 PSMD1Q99460 953 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 ERP44Q9BS26 406 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 TXLNGYQ9BZA5 131 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 VCPKMTQ9H867 229 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 GOPCQ9HD26 462 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 DMAC2Q9NW81 257 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 TMOD4Q9NZQ9 345 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 PRR12Q9ULL5 1215 aa18.69■□□□□ 0.58
USB1-201ENST00000219281 GOLGA6L10A0A0M3HER8 536 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 A0A1W2PRG0 241 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 FOXN3O00409 490 aaPredicted RBP18.68■□□□□ 0.58
USB1-201ENST00000219281 CFBP00751 764 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 ODR4Q5SWX8 454 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 RSBN1LQ6PCB5 846 aaPredicted RBP18.68■□□□□ 0.58
USB1-201ENST00000219281 CCDC121Q6ZUS5 278 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 DEFB132Q7Z7B7 95 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 ALG3Q92685 438 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 CSRNP1Q96S65 589 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 CEP89Q96ST8 783 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 NAP1L3Q99457 506 aaPredicted RBP18.68■□□□□ 0.58
USB1-201ENST00000219281 ZNF277Q9NRM2 450 aaPredicted RBP18.68■□□□□ 0.58
USB1-201ENST00000219281 WRAP73Q9P2S5 460 aaPredicted RBP18.68■□□□□ 0.58
USB1-201ENST00000219281 BCS1LQ9Y276 419 aa18.68■□□□□ 0.58
USB1-201ENST00000219281 ANKRD62A6NC57 917 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 SPDYE2BA6NHP3 402 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 PIK3CDO00329 1044 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 SPDYE6P0CI01 402 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 CCDC13Q8IYE1 715 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 C3orf20Q8ND61 904 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 BANK1Q8NDB2 785 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 SLC20A1Q8WUM9 679 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 HOOK2Q96ED9 719 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 ZDHHC18Q9NUE0 388 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 ZBTB12Q9Y330 459 aaPredicted RBP18.67■□□□□ 0.58
USB1-201ENST00000219281 TCP10L2B9ZVM9 353 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 EXOC3O60645 756 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 CAND2O75155 1236 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 SHBGP04278 402 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 VIL1P09327 827 aaKnown RBP18.67■□□□□ 0.58
USB1-201ENST00000219281 PAEPP09466 180 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 DPEP1P16444 411 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 PRELPP51888 382 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 PPP2R5CQ13362 524 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 PPP2R5AQ15172 486 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 BTNL9Q6UXG8 535 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 MDM1Q8TC05 714 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 SEC16BQ96JE7 1060 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 AGPAT1Q99943 283 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 SEL1LQ9UBV2 794 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 SNX24Q9Y343 169 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 COL4A5P29400 1685 aa18.67■□□□□ 0.58
USB1-201ENST00000219281 CLRN2A0PK11 232 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 KRT13P13646 458 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 ZNF131P52739 623 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 PLTPP55058 493 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 EIF3BP55884 814 aaKnown RBP18.66■□□□□ 0.58
USB1-201ENST00000219281 KIF22Q14807 665 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 STXBP4Q6ZWJ1 553 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 JAMLQ86YT9 394 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 SYCP3Q8IZU3 236 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 SLC5A5Q92911 643 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 TLCD1Q96CP7 247 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 PNMA2Q9UL42 364 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 ALG6Q9Y672 507 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 UBE4BO95155 1302 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 FAM187AA6NFU0 413 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 PHF20L1A8MW92 1017 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 GAS7O60861 476 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 VCAM1P19320 739 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 PMS2P54278 862 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 BFSP1Q12934 665 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 PPP2R5EQ16537 467 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 KIAA1755Q5JYT7 1200 aa18.66■□□□□ 0.58
USB1-201ENST00000219281 SWT1Q5T5J6 900 aaKnown RBP18.66■□□□□ 0.58
USB1-201ENST00000219281 RBM26Q5T8P6 1007 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms