RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 DNAJC6O75061 913 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 PGM3O95394 542 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 LMNAP02545 664 aaKnown RBP15.72■□□□□ 0.11
PTPRA-201ENST00000216877 EEF2P13639 858 aaKnown RBP15.72■□□□□ 0.11
PTPRA-201ENST00000216877 PTK2Q05397 1052 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 PPP2R5CQ13362 524 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 TMED2Q15363 201 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 LIN52Q52LA3 116 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 FAM182BQ5T319 152 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 ARHGEF18Q6ZSZ5 1173 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 CCDC65Q8IXS2 484 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 CYP4X1Q8N118 509 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 ACTRT1Q8TDG2 376 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 PHF20Q9BVI0 1012 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 MYH15Q9Y2K3 1946 aa15.72■□□□□ 0.11
PTPRA-201ENST00000216877 STK10O94804 968 aaKnown RBP15.71■□□□□ 0.11
PTPRA-201ENST00000216877 GJA8P48165 433 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 TMEM266Q2M3C6 531 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 HGSNATQ68CP4 663 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 MKNK1Q9BUB5 465 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 FAM192AQ9GZU8 254 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 FAF1Q9UNN5 650 aaPredicted RBP15.71■□□□□ 0.11
PTPRA-201ENST00000216877 WASF2Q9Y6W5 498 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 ABCC12Q96J65 1359 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 ATP5HO75947 161 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 WFS1O76024 890 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 BAG3O95817 575 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 VIL1P09327 827 aaKnown RBP15.71■□□□□ 0.11
PTPRA-201ENST00000216877 DCAF17Q5H9S7 520 aaPredicted RBP15.71■□□□□ 0.11
PTPRA-201ENST00000216877 TMEM110Q86TL2 294 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 SDR42E1Q8WUS8 393 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 FAM161BQ96MY7 647 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 SMIM22K7EJ46 135 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 KLRC4O43908 158 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 NAALADL2Q58DX5 795 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 CYP4F22Q6NT55 531 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 TRIM9Q9C026 710 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 NPHS2Q9NP85 383 aa15.71■□□□□ 0.11
PTPRA-201ENST00000216877 PALM3A6NDB9 673 aaPredicted RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 THAP12O43422 761 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 OR6B1O95007 311 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 PYGMP11217 842 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 OVGP1Q12889 678 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 MTDHQ86UE4 582 aaKnown RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 PALB2Q86YC2 1186 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 HIPK4Q8NE63 616 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 SHISA4Q96DD7 197 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 CALML4Q96GE6 196 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 STRBPQ96SI9 672 aaKnown RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 MMTAG2Q9BU76 263 aaKnown RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 TBX10O75333 385 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 ITGA2BP08514 1039 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 VAV1P15498 845 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 KRT15P19012 456 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 ATP5DP30049 168 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 HNRNPH3P31942 346 aaKnown RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 POLGP54098 1239 aaPredicted RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 SLC34A1Q06495 639 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 STRN3Q13033 797 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 IFIT5Q13325 482 aaKnown RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 KYNUQ16719 465 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 RABL6Q3YEC7 729 aaPredicted RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 LENG1Q96BZ8 264 aaPredicted RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 ZNF653Q96CK0 615 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 ZNF184Q99676 751 aaPredicted RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 PRDM16Q9HAZ2 1276 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 LRP2BPQ9P2M1 347 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 CICQ96RK0 1608 aaPredicted RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 CYP2D7A0A087X1C5 515 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 MYBP10242 640 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 IL2RBP14784 551 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 TXKP42681 527 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 KCNQ4P56696 695 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 WASHC2DQ5SRD0 308 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 TRIM67Q6ZTA4 783 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 NANOGNBQ7Z5D8 188 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 CROCCP2Q86T23 111 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 NME8Q8N427 588 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 MIS12Q9H081 205 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 ALG13Q9NP73 1137 aaKnown RBP15.7■□□□□ 0.1
PTPRA-201ENST00000216877 CHKBQ9Y259 395 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 ZNF510Q9Y2H8 683 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 LAMB4A4D0S4 1761 aa15.7■□□□□ 0.1
PTPRA-201ENST00000216877 ADAMTS3O15072 1205 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 TOM1O60784 492 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 GJB6O95452 261 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 POTEJP0CG39 1038 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 CETN2P41208 172 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 PKN1Q16512 942 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 HP1BP3Q5SSJ5 553 aaPredicted RBP15.69■□□□□ 0.1
PTPRA-201ENST00000216877 TRIM50Q86XT4 487 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 JDP2Q8WYK2 163 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 UBA5Q9GZZ9 404 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 LRMDAQ9H2I8 198 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 OSGEPQ9NPF4 335 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 CEP72Q9P209 647 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 CHORDC1Q9UHD1 332 aaPredicted RBP15.69■□□□□ 0.1
PTPRA-201ENST00000216877 PHTF1Q9UMS5 762 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 RASA4BC9J798 803 aa15.69■□□□□ 0.1
PTPRA-201ENST00000216877 POC1B-GALNT4F8VUJ3 575 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms