RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 APEX2Q9UBZ4 518 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 KCNG1Q9UIX4 513 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 MYH9P35579 1960 aaKnown RBP32.33■■■□□ 2.77
PABPN1-201ENST00000216727 PMM2O15305 246 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 NAB2Q15742 525 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 ENOX2Q16206 610 aaKnown RBP32.33■■■□□ 2.77
PABPN1-201ENST00000216727 ZNF302Q9NR11 478 aa32.33■■■□□ 2.77
PABPN1-201ENST00000216727 ATP8B3O60423 1300 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 IGKV6D-21A0A0A0MT36 114 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 ABCD1P33897 745 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 CETN1Q12798 172 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 MOGSQ13724 837 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 LMO3Q8TAP4 145 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 EPC1Q9H2F5 836 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 DNAJC12Q9UKB3 198 aa32.32■■■□□ 2.76
PABPN1-201ENST00000216727 F8VZ95 297 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 UBA1P22314 1058 aaKnown RBP32.31■■■□□ 2.76
PABPN1-201ENST00000216727 CNGA1P29973 690 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 ADSSP30520 456 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 FASTKD5Q7L8L6 764 aaKnown RBP32.31■■■□□ 2.76
PABPN1-201ENST00000216727 ANKRD13CQ8N6S4 541 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 RPGRIP1Q96KN7 1286 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 KIFC3Q9BVG8 833 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 DDX41Q9UJV9 622 aaKnown RBP32.31■■■□□ 2.76
PABPN1-201ENST00000216727 SNX12Q9UMY4 172 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 BTNL10A8MVZ5 291 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 H0YCG3 227 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 TGFB3P10600 412 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 SOX5P35711 763 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 DLG4P78352 724 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 CKAP4Q07065 602 aaKnown RBP32.31■■■□□ 2.76
PABPN1-201ENST00000216727 VPS36Q86VN1 386 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 PARD6BQ9BYG5 372 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 EMSYQ7Z589 1322 aa32.31■■■□□ 2.76
PABPN1-201ENST00000216727 SORBS3O60504 671 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 GFPT2O94808 682 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 ATP4AP20648 1035 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 SOX10P56693 466 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 C1orf220Q5T0J3 134 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 ZNF526Q8TF50 670 aaPredicted RBP32.3■■■□□ 2.76
PABPN1-201ENST00000216727 KCNN1Q92952 543 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 OPTNQ96CV9 577 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 ZNF446Q9NWS9 450 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 NENFQ9UMX5 172 aa32.3■■■□□ 2.76
PABPN1-201ENST00000216727 ANKRD63C9JTQ0 380 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 OATP04181 439 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 NEDD9Q14511 834 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 KIAA0753Q2KHM9 967 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 ARMC9Q7Z3E5 817 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 MSANTD4Q8NCY6 345 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 IFT74Q96LB3 600 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 NAGPAQ9UK23 515 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 SRGAP2O75044 1071 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 FARP2O94887 1054 aaPredicted RBP32.29■■■□□ 2.76
PABPN1-201ENST00000216727 PPP3CAQ08209 521 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 BMS1Q14692 1282 aaKnown RBP32.29■■■□□ 2.76
PABPN1-201ENST00000216727 DRAP1Q14919 205 aaPredicted RBP32.29■■■□□ 2.76
PABPN1-201ENST00000216727 RBPJLQ9UBG7 517 aa32.29■■■□□ 2.76
PABPN1-201ENST00000216727 MTERF2Q49AM1 385 aa32.28■■■□□ 2.76
PABPN1-201ENST00000216727 VTI1AQ96AJ9 217 aa32.28■■■□□ 2.76
PABPN1-201ENST00000216727 MPHOSPH6Q99547 160 aaKnown RBP32.28■■■□□ 2.76
PABPN1-201ENST00000216727 NIFKQ9BYG3 293 aaKnown RBP32.28■■■□□ 2.76
PABPN1-201ENST00000216727 GPR88Q9GZN0 384 aa32.28■■■□□ 2.76
PABPN1-201ENST00000216727 ANKZF1Q9H8Y5 726 aa32.28■■■□□ 2.76
PABPN1-201ENST00000216727 ARHGAP28Q9P2N2 729 aa32.28■■■□□ 2.76
PABPN1-201ENST00000216727 ADGRA3Q8IWK6 1321 aa32.28■■■□□ 2.76
PABPN1-201ENST00000216727 ZC3H4Q9UPT8 1303 aaKnown RBP32.28■■■□□ 2.76
PABPN1-201ENST00000216727 MYH10P35580 1976 aa32.28■■■□□ 2.76
PABPN1-201ENST00000216727 CCDC172P0C7W6 258 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 OSBPP22059 807 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 SCP2P22307 547 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 SNRNP35Q16560 246 aaKnown RBP32.27■■■□□ 2.76
PABPN1-201ENST00000216727 EPC2Q52LR7 807 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 BRDTQ58F21 947 aaPredicted RBP32.27■■■□□ 2.76
PABPN1-201ENST00000216727 TMCO3Q6UWJ1 677 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 ZSWIM2Q8NEG5 633 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 PLEKHO2Q8TD55 490 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 FBXL18Q96ME1 805 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 POLR3FQ9H1D9 316 aaPredicted RBP32.27■■■□□ 2.76
PABPN1-201ENST00000216727 TXNRD2Q9NNW7 524 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 USP20Q9Y2K6 914 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 EVI5O60447 810 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 KLRC1P26715 233 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 EMC2Q15006 297 aa32.27■■■□□ 2.76
PABPN1-201ENST00000216727 LRRC37A2A6NM11 1700 aa32.26■■■□□ 2.76
PABPN1-201ENST00000216727 ADRB2P07550 413 aa32.26■■■□□ 2.76
PABPN1-201ENST00000216727 PHLDB3Q6NSJ2 640 aa32.26■■■□□ 2.76
PABPN1-201ENST00000216727 ALKBH5Q6P6C2 394 aaKnown RBP32.26■■■□□ 2.76
PABPN1-201ENST00000216727 MMS19Q96T76 1030 aa32.26■■■□□ 2.76
PABPN1-201ENST00000216727 DHX33Q9H6R0 707 aaKnown RBP32.26■■■□□ 2.76
PABPN1-201ENST00000216727 PCDHGC5Q9Y5F6 944 aa32.26■■■□□ 2.76
PABPN1-201ENST00000216727 GSTTP1A0A1W2PQM5 241 aa32.26■■■□□ 2.75
PABPN1-201ENST00000216727 GLTPD2A6NH11 291 aa32.26■■■□□ 2.75
PABPN1-201ENST00000216727 POLGP54098 1239 aaPredicted RBP32.26■■■□□ 2.75
PABPN1-201ENST00000216727 LDLRAD1Q5T700 205 aa32.26■■■□□ 2.75
PABPN1-201ENST00000216727 SLC39A4Q6P5W5 647 aa32.26■■■□□ 2.75
PABPN1-201ENST00000216727 PACSIN1Q9BY11 444 aa32.26■■■□□ 2.75
PABPN1-201ENST00000216727 OGFRQ9NZT2 677 aa32.26■■■□□ 2.75
PABPN1-201ENST00000216727 TSKSQ9UJT2 592 aa32.26■■■□□ 2.75
PABPN1-201ENST00000216727 BUB1O43683 1085 aa32.25■■■□□ 2.75
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms