RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ARID5AQ03989 594 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 GFPT1Q06210 699 aaPredicted RBP18.96■□□□□ 0.63
VRK1-201ENST00000216639 USP37Q86T82 979 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 UBXN4Q92575 508 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 KIFC3Q9BVG8 833 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 DDX41Q9UJV9 622 aaKnown RBP18.96■□□□□ 0.63
VRK1-201ENST00000216639 UTRNP46939 3433 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 LRRC37A2A6NM11 1700 aa18.96■□□□□ 0.63
VRK1-201ENST00000216639 TISP43B9A030 160 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 STAT1P42224 750 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 SOX10P56693 466 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 SLC18A3Q16572 532 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 LY6KQ17RY6 165 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 BRDTQ58F21 947 aaPredicted RBP18.95■□□□□ 0.62
VRK1-201ENST00000216639 VPS36Q86VN1 386 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 ZNF710Q8N1W2 664 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 CEP112Q8N8E3 955 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 MORC4Q8TE76 937 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 ZNF526Q8TF50 670 aaPredicted RBP18.95■□□□□ 0.62
VRK1-201ENST00000216639 FGD4Q96M96 766 aa18.95■□□□□ 0.62
VRK1-201ENST00000216639 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.95■□□□□ 0.62
VRK1-201ENST00000216639 INTS2Q9H0H0 1204 aaKnown RBP18.95■□□□□ 0.62
VRK1-201ENST00000216639 DHX33Q9H6R0 707 aaKnown RBP18.95■□□□□ 0.62
VRK1-201ENST00000216639 RCCD1A6NED2 376 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 PDHXO00330 501 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 NOP56O00567 594 aaKnown RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 PJA2O43164 708 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 TACC1O75410 805 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 CCDC172P0C7W6 258 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 POTEJP0CG39 1038 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 CYP2C8P10632 490 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 FERP16591 822 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 TCF7P36402 384 aaPredicted RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 JAM2P57087 298 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 HSP90AA2PQ14568 343 aaPredicted RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 CBWD6Q4V339 395 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 CBWD3Q5JTY5 395 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 CBWD5Q5RIA9 395 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 C10orf76Q5T2E6 689 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 IQCEQ6IPM2 695 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 GPIHBP1Q8IV16 184 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 TRIM58Q8NG06 486 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 VTI1AQ96AJ9 217 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 PORCNQ9H237 461 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 GBA2Q9HCG7 927 aaPredicted RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 ARHGAP28Q9P2N2 729 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 TFR2Q9UP52 801 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 EMSYQ7Z589 1322 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 CCL15-CCL14A0A0B4J2E2 113 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 ANO9A1A5B4 782 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 MACROD2A1Z1Q3 448 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 HNRNPDLO14979 420 aaKnown RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 PRKCIP41743 596 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 GCLCP48506 637 aaPredicted RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 STRN3Q13033 797 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 SNRNP35Q16560 246 aaKnown RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 CCL15Q16663 113 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 CELF3Q5SZQ8 465 aaKnown RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 IRF2BP2Q7Z5L9 587 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 EXOC8Q8IYI6 725 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 C2orf69Q8N8R5 385 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 BICD1Q96G01 975 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 ALS2CR12Q96Q35 445 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 STK33Q9BYT3 514 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 R3HDMLQ9H3Y0 253 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 APEX2Q9UBZ4 518 aa18.94■□□□□ 0.62
VRK1-201ENST00000216639 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.94■□□□□ 0.62
VRK1-201ENST00000216639 V9GYY5 206 aaPredicted RBP18.94■□□□□ 0.62
VRK1-201ENST00000216639 PMM2O15305 246 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 TADA3O75528 432 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 GARTP22102 1010 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 NAMPTP43490 491 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 TUBB4BP68371 445 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 NAA30Q147X3 362 aaPredicted RBP18.93■□□□□ 0.62
VRK1-201ENST00000216639 ELF2Q15723 593 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 WHAMMP3Q1A5X7 153 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 ANKRD23Q86SG2 305 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 DHX37Q8IY37 1157 aaKnown RBP18.93■□□□□ 0.62
VRK1-201ENST00000216639 DEPTORQ8TB45 409 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 POMGNT1Q8WZA1 660 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 KCNN1Q92952 543 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 PCYT2Q99447 389 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 EFCC1Q9HA90 598 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 DNAJC12Q9UKB3 198 aa18.93■□□□□ 0.62
VRK1-201ENST00000216639 ANKRD63C9JTQ0 380 aa18.92■□□□□ 0.62
VRK1-201ENST00000216639 ADSSP30520 456 aa18.92■□□□□ 0.62
VRK1-201ENST00000216639 MCCD1P59942 119 aaPredicted RBP18.92■□□□□ 0.62
VRK1-201ENST00000216639 ENPEPQ07075 957 aa18.92■□□□□ 0.62
VRK1-201ENST00000216639 TTLL4Q14679 1199 aa18.92■□□□□ 0.62
VRK1-201ENST00000216639 ENOX2Q16206 610 aaKnown RBP18.92■□□□□ 0.62
VRK1-201ENST00000216639 ERCC6LQ2NKX8 1250 aa18.92■□□□□ 0.62
VRK1-201ENST00000216639 RNF10Q8N5U6 811 aaKnown RBP18.92■□□□□ 0.62
VRK1-201ENST00000216639 BBXQ8WY36 941 aaPredicted RBP18.92■□□□□ 0.62
VRK1-201ENST00000216639 GLG1Q92896 1179 aa18.92■□□□□ 0.62
VRK1-201ENST00000216639 MS4A4AQ96JQ5 239 aa18.92■□□□□ 0.62
VRK1-201ENST00000216639 BTBD19C9JJ37 291 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 KIAA0391O15091 583 aaKnown RBP18.91■□□□□ 0.62
VRK1-201ENST00000216639 SOX5P35711 763 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 ARL2P36404 184 aa18.91■□□□□ 0.62
VRK1-201ENST00000216639 DLG4P78352 724 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms