RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 PDXDC1Q6P996 788 aa18.52■□□□□ 0.56
CHGA-201ENST00000216492 PPP4R3CPQ6ZMV5 832 aa18.52■□□□□ 0.56
CHGA-201ENST00000216492 MMS19Q96T76 1030 aa18.52■□□□□ 0.56
CHGA-201ENST00000216492 PDGFCQ9NRA1 345 aa18.52■□□□□ 0.56
CHGA-201ENST00000216492 TRAF3IP3Q9Y228 551 aa18.52■□□□□ 0.56
CHGA-201ENST00000216492 KIAA1217Q5T5P2 1943 aa18.52■□□□□ 0.55
CHGA-201ENST00000216492 SRGAP2O75044 1071 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 ATP4AP20648 1035 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 KCNA1Q09470 495 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 ADAM9Q13443 819 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 TTLL4Q14679 1199 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 EDRF1Q3B7T1 1238 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 STXBP4Q6ZWJ1 553 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 ZNF467Q7Z7K2 595 aaPredicted RBP18.51■□□□□ 0.55
CHGA-201ENST00000216492 DHX37Q8IY37 1157 aaKnown RBP18.51■□□□□ 0.55
CHGA-201ENST00000216492 CAPZA3Q96KX2 299 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 DRC1Q96MC2 740 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 SEPT9Q9UHD8 586 aaPredicted RBP18.51■□□□□ 0.55
CHGA-201ENST00000216492 PCDHB13Q9Y5F0 798 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 SSU72P8A0A1W2PR75 194 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 FAM155AB1AL88 458 aaPredicted RBP18.51■□□□□ 0.55
CHGA-201ENST00000216492 PDXKO00764 312 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 ZNF263O14978 683 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 PLS3P13797 630 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 STAT5BP51692 787 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 HSDL1Q3SXM5 330 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 FAM102BQ5T8I3 360 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 SCFD2Q8WU76 684 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 BAP1Q92560 729 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 SYN2Q92777 582 aaPredicted RBP18.51■□□□□ 0.55
CHGA-201ENST00000216492 GPRC5CQ9NQ84 441 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 CYP26B1Q9NR63 512 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 ZKSCAN7Q9P0L1 754 aaPredicted RBP18.51■□□□□ 0.55
CHGA-201ENST00000216492 CEP72Q9P209 647 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 DIS3Q9Y2L1 958 aaKnown RBP18.51■□□□□ 0.55
CHGA-201ENST00000216492 DUSP10Q9Y6W6 482 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 IGSF9BQ9UPX0 1349 aa18.51■□□□□ 0.55
CHGA-201ENST00000216492 TCF7P36402 384 aaPredicted RBP18.5■□□□□ 0.55
CHGA-201ENST00000216492 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
CHGA-201ENST00000216492 CASP8Q14790 479 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 PCYT2Q99447 389 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 LUC7LQ9NQ29 371 aaKnown RBP18.5■□□□□ 0.55
CHGA-201ENST00000216492 FAM184BQ9ULE4 1060 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 TRPM7Q96QT4 1865 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 NOP56O00567 594 aaKnown RBP18.5■□□□□ 0.55
CHGA-201ENST00000216492 CALUO43852 315 aaPredicted RBP18.5■□□□□ 0.55
CHGA-201ENST00000216492 TLR2O60603 784 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 DGAT1O75907 488 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 PRLRP16471 622 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 MARSP56192 900 aaKnown RBP18.5■□□□□ 0.55
CHGA-201ENST00000216492 SLC9C1Q4G0N8 1177 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 HSP90B2PQ58FF3 399 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 SPATA33Q96N06 139 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 PDE11AQ9HCR9 933 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 TYW1Q9NV66 732 aaKnown RBP18.5■□□□□ 0.55
CHGA-201ENST00000216492 SNX12Q9UMY4 172 aa18.5■□□□□ 0.55
CHGA-201ENST00000216492 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.5■□□□□ 0.55
CHGA-201ENST00000216492 SLC15A5A6NIM6 579 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 TMEM88BA6NKF7 163 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 CETN3O15182 167 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 ECM2O94769 699 aaPredicted RBP18.49■□□□□ 0.55
CHGA-201ENST00000216492 OATP04181 439 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 MAPTP10636 758 aaKnown RBP18.49■□□□□ 0.55
CHGA-201ENST00000216492 MAGEA1P43355 309 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 TMEM63BQ5T3F8 832 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 SFMBT2Q5VUG0 894 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 FAM160B1Q5W0V3 765 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 TAPT1Q6NXT6 567 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 MAMDC4Q6UXC1 1216 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 KSR1Q8IVT5 923 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 COPS5Q92905 334 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 MAML3Q96JK9 1138 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 GPR20Q99678 358 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 AZI2Q9H6S1 392 aa18.49■□□□□ 0.55
CHGA-201ENST00000216492 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.49■□□□□ 0.55
CHGA-201ENST00000216492 ADGRA2Q96PE1 1338 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 ERICH4A6NGS2 130 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 H3BQF6 201 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 PJA2O43164 708 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 NR2F2P24468 414 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 PEX3P56589 373 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 SREBF2Q12772 1141 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 MTERF2Q49AM1 385 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 C17orf99Q6UX52 265 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 AFAP1L1Q8TED9 768 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 STRA6Q9BX79 667 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 VIPAS39Q9H9C1 493 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 ZFYVE28Q9HCC9 887 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 VTA1Q9NP79 307 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 PDLIM7Q9NR12 457 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 NRBP2Q9NSY0 501 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 SLC5A4Q9NY91 659 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 K7ENM7 598 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 TGFB1I1O43294 461 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 SNAI1O95863 264 aaPredicted RBP18.48■□□□□ 0.55
CHGA-201ENST00000216492 TCP1P17987 556 aaKnown RBP18.48■□□□□ 0.55
CHGA-201ENST00000216492 KCNMA1Q12791 1236 aa18.48■□□□□ 0.55
CHGA-201ENST00000216492 TDRD12Q587J7 1177 aaKnown RBP18.48■□□□□ 0.55
CHGA-201ENST00000216492 ZC3H3Q8IXZ2 948 aaKnown RBP18.48■□□□□ 0.55
CHGA-201ENST00000216492 KIFAP3Q92845 792 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms