RNA–Protein interactions for RNA: ENST00000216484.6

SPTLC2-201, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTLC2, Length 8,170 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-201ENST00000216484 DTX3LQ8TDB6 740 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 ZNF274Q96GC6 653 aaPredicted RBP15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 DMRT2Q9Y5R5 561 aa15.5■□□□□ 0.07
SPTLC2-201ENST00000216484 FOSP01100 380 aaPredicted RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 ATP12AP54707 1039 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 HNRNPH2P55795 449 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 FKBP3Q00688 224 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 CCDC81Q6ZN84 652 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 RHBDL2Q9NX52 303 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 ENO4A6NNW6 628 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 CHRNA3P32297 505 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 NME3Q13232 169 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 EIF4A2Q14240 407 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 MAPRE2Q15555 327 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 MEI1Q5TIA1 1274 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 PPM1NQ8N819 430 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 OTUD7AQ8TE49 926 aaPredicted RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 DCAF5Q96JK2 942 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 LINC00854A0A1B0GVQ3 168 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 GALNT4Q8N4A0 578 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 P2RX5Q93086 422 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 FAM162AQ96A26 154 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 DSCC1Q9BVC3 393 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 LAD1O00515 517 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 COPB2P35606 906 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 ATXN3P54252 364 aaPredicted RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 NR1H3Q13133 447 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 RTL3Q8N8U3 475 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 UNC45AQ9H3U1 944 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 ZC3H7BQ9UGR2 993 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 GOLGA8IPA6NC78 632 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 PGM1P36871 562 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 KLHL38Q2WGJ6 581 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 TSPYL6Q8N831 410 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 C17orf80Q9BSJ5 609 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 EIF2S1P05198 315 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 ABCB5Q2M3G0 1257 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 ZNF658Q5TYW1 1059 aaPredicted RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 MRPL1Q9BYD6 325 aaKnown RBP15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 PCDHA7Q9UN72 937 aa15.49■□□□□ 0.07
SPTLC2-201ENST00000216484 LOC102724159A0A0B4J2E5 919 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 PMS2P54278 862 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 DMPKQ09013 629 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 PWP2Q15269 919 aaKnown RBP15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 NAALADL2Q58DX5 795 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 DFFAO00273 331 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 FKBP9O95302 570 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 GGCXP38435 758 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 FKBP9P1Q75LS8 142 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 CEP95Q96GE4 821 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 BCL2L14Q9BZR8 327 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 ABCB6Q9NP58 842 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 PYCARDQ9ULZ3 195 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 AOX1Q06278 1338 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 CCDC22O60826 627 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 ARFIP2P53365 341 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 MRPL39Q9NYK5 338 aaKnown RBP15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 ABCC12Q96J65 1359 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 GPR162Q16538 588 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 MTERF2Q49AM1 385 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 ALFQ53S48 1182 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 FANCBQ8NB91 859 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 CUEDC2Q9H467 287 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 GOLPH3LQ9H4A5 285 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 OLFML3Q9NRN5 406 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 GTF2A1LQ9UNN4 478 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 MAP3K1Q13233 1512 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 GYS1P13807 737 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 ALDH6A1Q02252 535 aaKnown RBP15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 KCTD2Q14681 263 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 HES6Q96HZ4 224 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 UBAP1Q9NZ09 502 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 ADD3Q9UEY8 706 aaKnown RBP15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 HPCAP84074 193 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 C1orf131Q8NDD1 294 aaKnown RBP15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 HEMGNQ9BXL5 484 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 SYBUQ9NX95 663 aa15.48■□□□□ 0.07
SPTLC2-201ENST00000216484 UTP6Q9NYH9 597 aaKnown RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 BTBD18B2RXH4 712 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 PALMO75781 387 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 NDUFA10O95299 355 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 FLT3P36888 993 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ADCK2Q7Z695 626 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 DCUN1D1Q96GG9 259 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 SCN3BQ9NY72 215 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ADGRA2Q96PE1 1338 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 RALBP11234 206 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ABCE1P61221 599 aaKnown RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 INAQ16352 499 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 C6orf10Q5SRN2 563 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 EEPD1Q7L9B9 569 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 OMA1Q96E52 524 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 CARD9Q9H257 536 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 ADD1P35611 737 aaKnown RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 PLOD1Q02809 727 aaPredicted RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 CCDC60Q8IWA6 550 aaPredicted RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 LBHD1Q9BQE6 289 aaPredicted RBP15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 TNNQ9UQP3 1299 aa15.47■□□□□ 0.07
SPTLC2-201ENST00000216484 CFAP73A6NFT4 308 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms