RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 M0R2C6 588 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 KIAA0355O15063 1070 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 GYPEP15421 78 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 SUPT20HQ8NEM7 779 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 NTN5Q8WTR8 489 aaPredicted RBP4.18□□□□□ -1.74
CDKN3-201ENST00000216414 UIMC1Q96RL1 719 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 CPPED1Q9BRF8 314 aaPredicted RBP4.18□□□□□ -1.74
CDKN3-201ENST00000216414 ACSS2Q9NR19 701 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 SIRPGQ9P1W8 387 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 COL4A3Q01955 1670 aa4.18□□□□□ -1.74
CDKN3-201ENST00000216414 DVL2O14641 736 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 TRIM24O15164 1050 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 LPXNO60711 386 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 APOL3O95236 402 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 CD38P28907 300 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 BCAR1P56945 870 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 KRTAP10-9P60411 292 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 ZNF174Q15697 407 aa4.17□□□□□ -1.74
CDKN3-201ENST00000216414 TNPO3Q9Y5L0 923 aaKnown RBP4.17□□□□□ -1.74
CDKN3-201ENST00000216414 CENPVL1A0A0U1RR11 272 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 H7C1D1 291 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 ZFP36P26651 326 aaKnown RBP4.16□□□□□ -1.74
CDKN3-201ENST00000216414 MECP2P51608 486 aaKnown RBP4.16□□□□□ -1.74
CDKN3-201ENST00000216414 PTTG1IPP53801 180 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 USP14P54578 494 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 MYBPC3Q14896 1274 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 Q6YL49 198 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 RD3Q7Z3Z2 195 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 DDX53Q86TM3 631 aaKnown RBP4.16□□□□□ -1.74
CDKN3-201ENST00000216414 KIAA1958Q8N8K9 716 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 C16orf92Q96LL3 132 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 MRPL4Q9BYD3 311 aaKnown RBP4.16□□□□□ -1.74
CDKN3-201ENST00000216414 WDR11Q9BZH6 1224 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 KCNH6Q9H252 994 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 SYNPO2LQ9H987 977 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 ING3Q9NXR8 418 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 ANKFY1Q9P2R3 1169 aa4.16□□□□□ -1.74
CDKN3-201ENST00000216414 PTPDC1A2A3K4 754 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 FAM221BA6H8Z2 402 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 NRP1O14786 923 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 MAFGO15525 162 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 MTSS1O43312 755 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 HOXA3O43365 443 aaPredicted RBP4.15□□□□□ -1.75
CDKN3-201ENST00000216414 GLRX3O76003 335 aaKnown RBP4.15□□□□□ -1.75
CDKN3-201ENST00000216414 FSBPO95073 299 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 CYP17A1P05093 508 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 CDK4P11802 303 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 ITGB6P18564 788 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 PTX3P26022 381 aaPredicted RBP4.15□□□□□ -1.75
CDKN3-201ENST00000216414 ZEB1P37275 1124 aaPredicted RBP4.15□□□□□ -1.75
CDKN3-201ENST00000216414 TAP1Q03518 808 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 ADCY2Q08462 1091 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 RASA3Q14644 834 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 MAN2A1Q16706 1144 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 EPHA10Q5JZY3 1008 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 NME9Q86XW9 330 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 LCORLQ8N3X6 602 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 C7orf31Q8N865 590 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 CHST14Q8NCH0 376 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 OR5M3Q8NGP4 307 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 DEPDC7Q96QD5 511 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 HAPLN2Q9GZV7 340 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 MTG2Q9H4K7 406 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 TRIM39Q9HCM9 518 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 TRPM5Q9NZQ8 1165 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 SAMD15Q9P1V8 674 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 HDAC5Q9UQL6 1122 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 SPATA31A6Q5VVP1 1343 aa4.15□□□□□ -1.75
CDKN3-201ENST00000216414 AHRRA9YTQ3 701 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 CFBP00751 764 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 APOBEC3AP31941 199 aaPredicted RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 RANGAP1P46060 587 aaPredicted RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 CLK3P49761 638 aaKnown RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 FAM189BP81408 668 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 EPHA7Q15375 998 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 VPS72Q15906 364 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 ZCCHC8Q6NZY4 707 aaKnown RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 FAM83AQ86UY5 434 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 CMTR2Q8IYT2 770 aaKnown RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 GLB1L3Q8NCI6 653 aaPredicted RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 ZSWIM2Q8NEG5 633 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 CAVIN3Q969G5 261 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 MYEOVQ96EZ4 313 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 NOL10Q9BSC4 688 aaKnown RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 NDC1Q9BTX1 674 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 SLC46A2Q9BY10 475 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 CPEB1Q9BZB8 566 aaKnown RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 OSBPL6Q9BZF3 934 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 PITHD1Q9GZP4 211 aaPredicted RBP4.14□□□□□ -1.75
CDKN3-201ENST00000216414 SERHL2Q9H4I8 314 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 RSAD1Q9HA92 442 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 CABP5Q9NP86 173 aa4.14□□□□□ -1.75
CDKN3-201ENST00000216414 A0A0A6YYJ9 748 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 A0A0A6YYK5 440 aaPredicted RBP4.13□□□□□ -1.75
CDKN3-201ENST00000216414 CCDC163A0A0D9SF12 145 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 B4E1Z4 1266 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 KCNQ2O43526 872 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 OPHN1O60890 802 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 DNAJC6O75061 913 aa4.13□□□□□ -1.75
CDKN3-201ENST00000216414 ALDH1A2O94788 518 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms