RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 RNASELQ05823 741 aaKnown RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 BFSP1Q12934 665 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 MPHOSPH6Q99547 160 aaKnown RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 ISCUQ9H1K1 167 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 SALL1Q9NSC2 1324 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 GLI3P10071 1580 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 E9PMD0 336 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 K7ENM7 598 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 IGF2BP3O00425 579 aaKnown RBP eCLIP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 NOL3O60936 208 aaKnown RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 DCTN3O75935 186 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 COASYQ13057 564 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 ANKS1AQ92625 1134 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 KIF9Q9HAQ2 790 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 EPB41L4AQ9HCS5 686 aaPredicted RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 DNAJC12Q9UKB3 198 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 UTYO14607 1347 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 TOPAZ1Q8N9V7 1692 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 RGPD2P0DJD1 1756 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 DLATP10515 647 aaKnown RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 SARSP49591 514 aaKnown RBP12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 SPARCL1Q14515 664 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 PLCB4Q15147 1175 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 AGBL2Q5U5Z8 902 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 DGKHQ86XP1 1220 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 RSAD2Q8WXG1 361 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 TMEM60Q9H2L4 133 aa12.37□□□□□ -0.43
DNMT3B-201ENST00000201963 GLTPD2A6NH11 291 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 FAM153BP0C7A2 387 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 SH3BGRP55822 239 aaPredicted RBP12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 GRIK5Q16478 980 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 FAM153CQ494X1 144 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 SLFN12Q8IYM2 578 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 LRRC34Q8IZ02 419 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 CHURC1Q8WUH1 139 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 CCDC17Q96LX7 622 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 PCIF1Q9H4Z3 704 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 RAB20Q9NX57 234 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 GPRC5DQ9NZD1 345 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 FAM153AQ9UHL3 310 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 FAF1Q9UNN5 650 aaPredicted RBP12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 ARL2BPQ9Y2Y0 163 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 SYNGAP1Q96PV0 1343 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 CRY2Q49AN0 593 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 CASC4Q6P4E1 433 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 EPM2AIP1Q7L775 607 aaPredicted RBP12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 TMEM139Q8IV31 216 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 ERGIC2Q96RQ1 377 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 MRC1P22897 1456 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 PPP1R12AO14974 1030 aaPredicted RBP12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 CD19P15391 556 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 TNNI1P19237 187 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 UBXN2AP68543 259 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 NTRK3Q16288 839 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 ZNF746Q6NUN9 644 aaPredicted RBP12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 CCDC137Q6PK04 289 aaKnown RBP12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 HIPK4Q8NE63 616 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 BHMT2Q9H2M3 363 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 NOD1Q9Y239 953 aa12.36□□□□□ -0.43
DNMT3B-201ENST00000201963 CASQ2O14958 399 aaPredicted RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 ACTN1P12814 892 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 CCND1P24385 295 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 MAN1A1P33908 653 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 RWDD2BP57060 319 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 HP1BP3Q5SSJ5 553 aaPredicted RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 RFX8Q6ZV50 586 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 RHOT2Q8IXI1 618 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 CFAP57Q96MR6 1250 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 TMEM260Q9NX78 707 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 ARHGAP20Q9P2F6 1191 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 L3MBTL1Q9Y468 752 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 ALS2Q96Q42 1657 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 SPDYE2BA6NHP3 402 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 ATP5HO75947 161 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 SPDYE6P0CI01 402 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 COPB2P35606 906 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 NSFP46459 744 aaKnown RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 YWHAGP61981 247 aaKnown RBP eCLIP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 KIAA1755Q5JYT7 1200 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 DACT2Q5SW24 774 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 LRP10Q7Z4F1 713 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 CNPY4Q8N129 248 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 SYT2Q8N9I0 419 aaPredicted RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 AENQ8WTP8 325 aaKnown RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 ADAM33Q9BZ11 813 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 DDX20Q9UHI6 824 aaKnown RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 A0A087X0T9 212 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 FAM187AA6NFU0 413 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 FAM228BP0C875 321 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 SLC8A3P57103 927 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 SLC29A2Q14542 456 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 SWT1Q5T5J6 900 aaKnown RBP12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 STAMBPL1Q96FJ0 436 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 HEMGNQ9BXL5 484 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 SH3GLB2Q9NR46 395 aa12.35□□□□□ -0.43
DNMT3B-201ENST00000201963 ZFP69BQ9UJL9 534 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms