RNA–Protein interactions for RNA: ENST00000013807.9

ERCC1-201, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC1, Length 1,278 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-201ENST00000013807 EARS2Q5JPH6 523 aaKnown RBP17.77■□□□□ 0.44
ERCC1-201ENST00000013807 PLPP4Q5VZY2 271 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 PLA2G4FQ68DD2 849 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 PIK3AP1Q6ZUJ8 805 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 TMC7Q7Z402 723 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 SRGAP1Q7Z6B7 1085 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 MRPL10Q7Z7H8 261 aaKnown RBP17.77■□□□□ 0.44
ERCC1-201ENST00000013807 KSR1Q8IVT5 923 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 ENTPD7Q9NQZ7 604 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 AGPAT5Q9NUQ2 364 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 ORC3Q9UBD5 711 aaPredicted RBP17.77■□□□□ 0.44
ERCC1-201ENST00000013807 COL4A3BPQ9Y5P4 624 aa17.77■□□□□ 0.44
ERCC1-201ENST00000013807 TDRD15B5MCY1 1934 aaKnown RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 OFD1O75665 1012 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 LYPLA2O95372 231 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 YWHABP31946 246 aaKnown RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 PBX3P40426 434 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 POLGP54098 1239 aaPredicted RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 POU5F1BQ06416 359 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 PCBP1Q15365 356 aaKnown RBP eCLIP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 TWF2Q6IBS0 349 aaKnown RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 OTUD6AQ7L8S5 288 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 ZNF579Q8NAF0 562 aaKnown RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 RNF169Q8NCN4 708 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 PRPF31Q8WWY3 499 aaKnown RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 PSPC1Q8WXF1 523 aaKnown RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 CEP170P1Q96L14 293 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 ZSWIM4Q9H7M6 989 aa17.76■□□□□ 0.43
ERCC1-201ENST00000013807 PIN4Q9Y237 131 aaKnown RBP17.76■□□□□ 0.43
ERCC1-201ENST00000013807 BAG4O95429 457 aaKnown RBP17.75■□□□□ 0.43
ERCC1-201ENST00000013807 HOXA11P31270 313 aaPredicted RBP17.75■□□□□ 0.43
ERCC1-201ENST00000013807 GIT2Q14161 759 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 ME3Q16798 604 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 NOMO2Q5JPE7 1267 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 GLB1LQ6UWU2 654 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 HFE2Q6ZVN8 426 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 CATSPER4Q7RTX7 472 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 DDX53Q86TM3 631 aaKnown RBP17.75■□□□□ 0.43
ERCC1-201ENST00000013807 POTEDQ86YR6 584 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 TCP11Q8WWU5 503 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 GTF3C6Q969F1 213 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 PGBD4Q96DM1 585 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 IGSF21Q96ID5 467 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 NLRP4Q96MN2 994 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 HSD17B14Q9BPX1 270 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 LXNQ9BS40 222 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 NRDE2Q9H7Z3 1164 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 TBC1D13Q9NVG8 400 aa17.75■□□□□ 0.43
ERCC1-201ENST00000013807 SLITRK3O94933 977 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 GALTP07902 379 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 KRT2P35908 639 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 TECP42680 631 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 LAMTOR4Q0VGL1 99 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 NR5A1Q13285 461 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 BMS1Q14692 1282 aaKnown RBP17.74■□□□□ 0.43
ERCC1-201ENST00000013807 FERMT3Q86UX7 667 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 IFNLR1Q8IU57 520 aaPredicted RBP17.74■□□□□ 0.43
ERCC1-201ENST00000013807 CASP10Q92851 521 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 TMEM169Q96HH4 297 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 MFSD14AQ96MC6 490 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 ZBP1Q9H171 429 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 MINDY3Q9H8M7 445 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 PPP4R2Q9NY27 417 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 RGL1Q9NZL6 768 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 STK39Q9UEW8 545 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 PCDHB2Q9Y5E7 798 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 HCFC2Q9Y5Z7 792 aa17.74■□□□□ 0.43
ERCC1-201ENST00000013807 MTCL1Q9Y4B5 1905 aaKnown RBP17.74■□□□□ 0.43
ERCC1-201ENST00000013807 MEIS3P2A8K0S8 358 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 INPPL1O15357 1258 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 EIF5BO60841 1220 aaKnown RBP17.73■□□□□ 0.43
ERCC1-201ENST00000013807 NEFLP07196 543 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 CTSAP10619 480 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 ZXDAP98168 799 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 ITIH3Q06033 890 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 UBXN11Q5T124 520 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 AGMOQ6ZNB7 445 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 TRIM67Q6ZTA4 783 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 NSUN7Q8NE18 718 aaKnown RBP17.73■□□□□ 0.43
ERCC1-201ENST00000013807 LPPQ93052 612 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 ADAM7Q9H2U9 754 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 KANSL3Q9P2N6 904 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 PCDHA12Q9UN75 941 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 DENND4AQ7Z401 1863 aa17.73■□□□□ 0.43
ERCC1-201ENST00000013807 CNTNAP2Q9UHC6 1331 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 CACNA1HO95180 2353 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 KMT2EQ8IZD2 1858 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 FAM205CA6NFA0 338 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 NT5C1B-RDH14C9J2C7 533 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 CLASP2O75122 1294 aaKnown RBP17.72■□□□□ 0.43
ERCC1-201ENST00000013807 CXCL14O95715 111 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 XRCC6P12956 609 aaKnown RBP eCLIP17.72■□□□□ 0.43
ERCC1-201ENST00000013807 AXLP30530 894 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 MXD4Q14582 209 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-201ENST00000013807 EMC2Q15006 297 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 TPRNQ4KMQ1 711 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 TMEM173Q86WV6 379 aaPredicted RBP17.72■□□□□ 0.43
ERCC1-201ENST00000013807 VPS52Q8N1B4 723 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 CNNM3Q8NE01 707 aa17.72■□□□□ 0.43
ERCC1-201ENST00000013807 TMEM143Q96AN5 459 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms