RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ATP6V1G3Q96LB4 118 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 LRRC1Q9BTT6 524 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 WDR11Q9BZH6 1224 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 L1RE1Q9UN81 338 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 CLRN2A0PK11 232 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 MYCP01106 439 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 CDC25CP30307 473 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 MAK16Q9BXY0 300 aaKnown RBP13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 FGGP02679 453 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 ZFXP17010 805 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 CHMP6Q96FZ7 201 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 PNKPQ96T60 521 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 MLXIPLQ9NP71 852 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 PALMDQ9NP74 551 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 CCPG1Q9ULG6 757 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 TRPC6Q9Y210 931 aa13.01□□□□□ -0.33
TSPAN9-201ENST00000011898 POTEFA5A3E0 1075 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 PHF20L1A8MW92 1017 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 POTEIP0CG38 1075 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ZNF18P17022 549 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 SERPINB3P29508 390 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ERFP50548 548 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 PPP2R2AP63151 447 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 IL9RQ01113 521 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ORC2Q13416 577 aaPredicted RBP13□□□□□ -0.33
TSPAN9-201ENST00000011898 SNX1Q13596 522 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 SYDE2Q5VT97 1194 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 POTEGQ6S5H5 508 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 POTEEQ6S8J3 1075 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 FMO2Q99518 471 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 UBE2TQ9NPD8 197 aaPredicted RBP13□□□□□ -0.33
TSPAN9-201ENST00000011898 C1orf112Q9NSG2 853 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ECE2O60344 883 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ARHGAP4P98171 946 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 MYLK4Q86YV6 388 aaPredicted RBP13□□□□□ -0.33
TSPAN9-201ENST00000011898 POMGNT1Q8WZA1 660 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 CHMP2BQ9UQN3 213 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 PASKQ96RG2 1323 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 I3L4J1 428 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 THAP12O43422 761 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ERVK-24P63145 666 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 SEC23AQ15436 765 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 AOC3Q16853 763 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 THEMIS2Q5TEJ8 643 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ARMC3Q5W041 872 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ILDR2Q71H61 639 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 ADGRF4Q8IZF3 695 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 KIF2BQ8N4N8 673 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 VPS37BQ9H9H4 285 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 PICK1Q9NRD5 415 aa13□□□□□ -0.33
TSPAN9-201ENST00000011898 CCDC188H7C350 402 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 AKR1B1P15121 316 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 KCNA3P22001 575 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 STAT2P52630 851 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 ESRRGP62508 458 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 TRIM65Q6PJ69 517 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 PARD3BQ8TEW8 1205 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 HNRNPLLQ8WVV9 542 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 ZKSCAN4Q969J2 545 aaPredicted RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 C7orf25Q9BPX7 421 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 ABT1Q9ULW3 272 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 TARSL2A2RTX5 802 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 PDIA5Q14554 519 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 TXNRD3Q86VQ6 643 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 TRIML2Q8N7C3 387 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 SREK1Q8WXA9 508 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 ZNF653Q96CK0 615 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 CYFIP2Q96F07 1278 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 RUNDC3BQ96NL0 473 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 RIOK1Q9BRS2 568 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 RGL1Q9NZL6 768 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 ZFATQ9P243 1243 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 MYMKA6NI61 221 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 NR3C1P04150 777 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 IL1R1P14778 569 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 KNOP1Q1ED39 458 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 MAP3K21Q5TCX8 1036 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 NT5C1BQ96P26 610 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 MXD3Q9BW11 206 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 EDEM3Q9BZQ6 932 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 MIS12Q9H081 205 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 DDX47Q9H0S4 455 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 VPS33BQ9H267 617 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 TBK1Q9UHD2 729 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 ANGPTL2Q9UKU9 493 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 TCRBV5S4A2TA0A5A2 114 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 HNRNPDLO14979 420 aaKnown RBP12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 KLK7P49862 253 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 LIG4P49917 911 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 AP3B2Q13367 1082 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 CUL1Q13616 776 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 QRICH1Q2TAL8 776 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 RCSD1Q6JBY9 416 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 HIPK4Q8NE63 616 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 STAMBPL1Q96FJ0 436 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 SEC16BQ96JE7 1060 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 SUGT1Q9Y2Z0 365 aa12.99□□□□□ -0.33
TSPAN9-201ENST00000011898 ATF7P17544 494 aaPredicted RBP12.98□□□□□ -0.33
TSPAN9-201ENST00000011898 CCND1P24385 295 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms