RNA–Protein interactions for RNA: ENSMUST00000219577.1

Herc4-208, Transcript of Probable E3 ubiquitin-protein ligase HERC4, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Herc4, Length 3,914 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4-208ENSMUST00000219577 Lrrc38A2VDH3 298 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Epha3P29319 983 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Mcf2lQ64096 1149 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Pgrmc2Q80UU9 217 aaKnown RBP13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Rusc1Q8BG26 893 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Calhm6Q8C9E8 313 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Gnl3Q8CI11 538 aaKnown RBP13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Senp2Q91ZX6 588 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Hspbp1Q99P31 357 aaKnown RBP13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Extl2Q9ES89 330 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Rasal2E9PW37 1286 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Sstr3P30935 428 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Fam207aP58468 219 aaKnown RBP13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 RelaQ04207 549 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cyp11b1Q3TG86 501 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Nlrp4cQ3TKR3 982 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 EsrrbQ61539 433 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Prr18Q6PAN7 307 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Tbc1d10cQ8C9V1 444 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Ccdc137Q8R0K4 290 aaKnown RBP13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Q91Z58 1206 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Grtp1Q9D3N8 359 aa13.02□□□□□ -0.33
Herc4-208ENSMUST00000219577 Emc10Q3TAS6 258 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Brd9Q3UQU0 596 aaKnown RBP13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cyp2c67Q569X9 491 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Mtus1Q5HZI1 1210 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Rhbdf1Q6PIX5 856 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Nop9Q8BMC4 636 aaKnown RBP13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Lrrc4cQ8C031 640 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 SncbQ91ZZ3 133 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Q9D2Q3 444 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Krt17Q9QWL7 433 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Sucla2Q9Z2I9 463 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Znf804aA2AKY4 1200 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 MtrA6H5Y3 1253 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cfap221A9Q751 836 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Zcchc2Q69ZB8 1166 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Efcab14Q8BGQ6 484 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 YwhabQ9CQV8 246 aaKnown RBP13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cnga3Q9JJZ8 631 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Tspyl1O88852 379 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Adgrg6Q6F3F9 1165 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Znf618Q80YY7 953 aaKnown RBP13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Slc26a7Q8R2Z3 656 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Coro7Q9D2V7 922 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Scgb2b20Q9JI02 112 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Hs6st3Q9QYK4 470 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Rnf103Q9R1W3 683 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Mtmr7Q9Z2C9 660 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Sipa1l3G3X9J0 1776 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 Kat6bQ8BRB7 1872 aa13.01□□□□□ -0.33
Herc4-208ENSMUST00000219577 R3hdm1E9Q9Q2 1135 aaKnown RBP13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Msh3P13705 1091 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Eno1P17182 434 aaKnown RBP13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Rps6P62754 249 aaKnown RBP13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Agbl1Q09M05 972 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Ccdc50Q810U5 305 aaKnown RBP13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cdr2lA2A6T1 465 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Atp9aO70228 1047 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Adcy8P97490 1249 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Col9a2Q07643 688 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Znf367Q0VDT2 340 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Neto2Q8BNJ6 525 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Tnpo2Q99LG2 887 aaKnown RBP13□□□□□ -0.33
Herc4-208ENSMUST00000219577 IqcdQ9D3V1 458 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Hsf2bpQ9D4G2 338 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cnot8Q9D8X5 292 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Kcnq4Q9JK97 696 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Col22a1E9Q7P1 1613 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Oip5A2AQ14 241 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Prl6a1O35257 230 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Spout1Q3UHX9 385 aaKnown RBP13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Tmc3Q7TQ69 1130 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 CgasQ8C6L5 507 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Slc12a8Q8VI23 705 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Klc4Q9DBS5 619 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cpb2Q9JHH6 422 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Slc26a4Q9R155 780 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Col5a2Q3U962 1497 aa13□□□□□ -0.33
Herc4-208ENSMUST00000219577 Scgb2b7D3YYY1 112 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 ArsiQ32KI9 573 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Wdr41Q3UDP0 460 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 FaxcQ3UMF9 409 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Gm10488Q4KL05 212 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Six2Q62232 296 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Psmd5Q8BJY1 504 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 TbckQ8BM85 762 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Gtf2ird1Q9JI57 1104 aaKnown RBP12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Lrp5Q91VN0 1614 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cyth3O08967 399 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Kmt5aQ2YDW7 349 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Birc2Q62210 612 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Cct8l1Q80YT3 562 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Ciapin1Q8WTY4 309 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 GrapQ9CX99 217 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 1700016D06RikQ9DAA5 166 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Tlr2Q9QUN7 784 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Scn11aQ9R053 1765 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Lrrc74aA0A1Y7VMD6 494 aa12.99□□□□□ -0.33
Herc4-208ENSMUST00000219577 Tldc2A2ACG1 198 aa12.99□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 28.3 ms