RNA–Protein interactions for RNA: ENSMUST00000211945.1

Scn1b-203, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Scn1b, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-203ENSMUST00000211945 Tle2Q9WVB2 767 aa20.61■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Vmn2r87E9PZX4 848 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 2610008E11RikG3X964 669 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Lman2lP59481 347 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 P3h1Q3V1T4 739 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Usp13Q5BKP2 858 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Klra7Q60654 280 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Sycp1Q62209 993 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Smarca1Q6PGB8 1046 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 TbataQ7TSD4 393 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Elac2Q80Y81 831 aaKnown RBP20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 6820408C15RikQ8BJX2 354 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Usp38Q8BW70 1042 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Sbk1Q8QZX0 417 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Luzp1Q8R4U7 1068 aaKnown RBP20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Rab3il1Q8VDV3 383 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Trpv6Q91WD2 767 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Prl2b1Q9DAZ2 228 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 DgkeQ9R1C6 564 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Casp8ap2Q9WUF3 1962 aa20.6■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Gm45208A0A140LJ36 292 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Gm11985A0A1B0GS61 206 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Magea10A2AMW4 325 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Otud7bB2RUR8 840 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Fam129cD3YZB0 591 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Ccl26F8VQM2 93 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Hsp90aa1P07901 733 aaKnown RBP20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Fmr1P35922 614 aaKnown RBP20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Mcm5P49718 733 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 PrkcbP68404 671 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Snx13Q6PHS6 957 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Cracr2bQ80ZJ8 394 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Ttc27Q8CD92 847 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Ccdc81Q9D5W4 654 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Pex11aQ9Z211 246 aa20.59■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Lcmt1A0A0U1RNF2 332 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Gm13084A2A8N0 494 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Irf8P23611 424 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Mmp3P28862 477 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Inpp5jP59644 1003 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 SnrpfP62307 86 aaKnown RBP20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Stim1P70302 685 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Gse1Q3U3C9 1213 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Asap3Q5U464 904 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Cd180Q62192 661 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Rbm12b2Q66JV4 834 aaKnown RBP20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Fhod1Q6P9Q4 1197 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Tcaf1Q8BNE1 924 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Ago3Q8CJF9 860 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Pcdha12Q91Y18 950 aa20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Add1Q9QYC0 735 aaKnown RBP20.58■□□□□ 0.89
Scn1b-203ENSMUST00000211945 Ttll10A4Q9F3 704 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Nptx2O70340 429 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Cbfa2t2O70374 594 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Col6a1Q04857 1025 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Fam109bQ14B98 259 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Ogfod1Q3U0K8 545 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Qsox1Q8BND5 748 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Usp37Q8C0R0 979 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Sox30Q8CGW4 782 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Ablim1Q8K4G5 861 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Ddx50Q99MJ9 734 aaKnown RBP20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Smyd3Q9CWR2 428 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Cnga3Q9JJZ8 631 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Arih2Q9Z1K6 492 aa20.58■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Gm5624F6ZZG8 207 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 TbckQ8BM85 762 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Kcnv1Q8BZN2 503 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Rem2Q8VEL9 341 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Ankrd1Q9CR42 319 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Tmem39aQ9CYC3 486 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 B4galt5Q9JMK0 388 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Dnajb7Q9QYI8 312 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 AmfrQ9R049 643 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Gyg1Q9R062 333 aa20.57■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Grin2dQ03391 1323 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Pak1O88643 545 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 AdssP46664 456 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 TdgP56581 421 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Arf4P61750 180 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Ano5Q75UR0 904 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Dzip3Q7TPV2 1204 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Wbp1lQ8BGW2 348 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 NelfbQ8C4Y3 580 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Znf467Q8JZL0 594 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Tmem134Q8R0J4 195 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Reep2Q8VCD6 254 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Tab2Q99K90 693 aa20.56■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Map7d2A2AG50 781 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Mmrn2A6H6E2 943 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Cfap73J3QPZ5 306 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Usp25P57080 1055 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 LxnP70202 222 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 PtgdrP70263 357 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Ano7Q14AT5 859 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Lrrc55Q3UY51 311 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Slc26a2Q62273 739 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 March6Q6ZQ89 909 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Sval3Q76I99 144 aa20.55■□□□□ 0.88
Scn1b-203ENSMUST00000211945 Mapk15Q80Y86 549 aa20.55■□□□□ 0.88
Retrieved 100 of 22,080 RNA–protein pairs in 30.4 ms