RNA–Protein interactions for RNA: ENSMUST00000168162.4

Pdgfra-202, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pdgfra, Length 6,834 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-202ENSMUST00000168162 Hes7Q8BKT2 225 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Sgip1Q8VD37 806 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Lman2Q9DBH5 358 aaKnown RBP10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Hps5P59438 1126 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Spink5Q148R4 1017 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Pja2Q80U04 707 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Q80ZQ3 298 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Ccdc181Q80ZU5 509 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Rpa3Q9CQ71 121 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Trmt11Q9CWH5 460 aa10.88□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gm21149A0A0G2JFY7 255 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Speer4cG3UXD1 256 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gm17019K7N6W5 255 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Meis1Q60954 390 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Sin3bQ62141 1098 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 1700001K19RikQ80ZT1 219 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gm9758Q80ZT2 255 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Hus1Q8BQY8 280 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Trim52Q8CDV4 233 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Pcdhb11Q91UZ8 797 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 KeraO35367 351 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Htr3aP23979 487 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 MatkP41242 505 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Tulp2P46686 562 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Sesn2P58043 480 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Q6PAC4 1279 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Ints6Q6PCM2 883 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 GmipQ6PGG2 971 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 NapepldQ8BH82 396 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gatad2aQ8CHY6 629 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Fbxo32Q9CPU7 355 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gm16486A0A1D5RMD1 1434 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 PrphP15331 475 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Nol4P60954 483 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 YdjcQ14BV6 310 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Dok6Q2MHE5 331 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Rnf40Q3U319 1001 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Sec62Q8BU14 398 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Tceanc2Q8R2M0 207 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Stard13Q923Q2 1113 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Cttnbp2nlQ99LJ0 638 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Hmgn5Q9JL35 406 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Abcb1bP06795 1276 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 PpardP35396 440 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Capza2P47754 286 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gucy2eP52785 1108 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Usp17laQ61068 526 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Bend3Q6PAL0 825 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Lrrc24Q8BHA1 521 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Cxcl16Q8BSU2 246 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Rbms1Q91W59 403 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Rnf186Q9D241 226 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Mrpl17Q9D8P4 176 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Arl4aP61213 200 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Scn2bQ56A07 215 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Vmn1r209Q5NC97 312 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gpbp1Q6NXH3 473 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Zfp512bQ6PHP4 879 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 QarsQ8BML9 775 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Q8CIL4 281 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Srgap2Q91Z67 1071 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Prc1Q99K43 603 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Mis12Q9CY25 206 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Mrpl44Q9CY73 333 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Fam114a1Q9D281 569 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 NcapgE9PWG6 1004 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Gja5Q01231 358 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Ano7Q14AT5 859 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Xxylt1Q3U4G3 392 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 PapolgQ6PCL9 739 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Catsper4Q8BVN3 442 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Prb1Q91X93 504 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Polr3fQ921X6 316 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Slc15a2Q9ES07 729 aa10.87□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Arap3Q8R5G7 1538 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Cdc42bpgQ80UW5 1551 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Trim55G3X8Y1 545 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Fgfr2P21803 821 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Olfr8Q60892 310 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Cavin2Q63918 418 aaKnown RBP10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Olfr855Q7TRF8 312 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 St8sia6Q8K4T1 398 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Rassf7Q9DD19 359 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 TnmdQ9EP64 317 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Bin1O08539 588 aaKnown RBP10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 SobpQ0P5V2 864 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Kdm1aQ6ZQ88 853 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Ttll4Q80UG8 1193 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Map3k21Q8VDG6 1002 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Zw10O54692 779 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Ier5O89113 308 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Tagap1P0CAX8 505 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 PfkmP47857 780 aaKnown RBP10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Zc3h15Q3TIV5 426 aaKnown RBP10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Fgfr1opQ66JX5 399 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Atg16l2Q6KAU8 623 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Q8CD60 292 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Atf7Q8R0S1 413 aa10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 SmapQ9R0P4 181 aaKnown RBP10.86□□□□□ -0.67
Pdgfra-202ENSMUST00000168162 Cdr2lA2A6T1 465 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms