RNA–Protein interactions for RNA: ENSMUST00000109578.7

Vps54-202, Transcript of Vacuolar protein sorting-associated protein 54, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Vps54, Length 4,273 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54-202ENSMUST00000109578 StilQ60988 1262 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Lamc2Q61092 1191 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Oca2Q62052 833 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ddx31Q6NZQ2 687 aaKnown RBP12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Rusc1Q8BG26 893 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Havcr2Q8VIM0 281 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ubiad1Q9DC60 336 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Astn1Q61137 1302 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Plxnb2B2RXS4 1842 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 DgkkE9Q7N4 1118 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 MyocO70624 490 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Pon1P52430 355 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Q32P12 615 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Rhox12Q4TU81 186 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Adgrg6Q6F3F9 1165 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Lrrc45Q8CIM1 670 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Bst2Q8R2Q8 172 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 SfpqQ8VIJ6 699 aaKnown RBP12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 WaslQ91YD9 501 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Rtn3Q9ES97 964 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Tex13c2A0A0G2JGA3 530 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ppp1r9aH3BJD6 1292 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Eftud2O08810 971 aaKnown RBP12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 AfpP02772 605 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Pik3caP42337 1068 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Fam207aP58468 219 aaKnown RBP12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Cep126Q0VBV7 1103 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Rrp36Q3UFY0 244 aaKnown RBP12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Dab2ipQ3UHC7 1189 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ehbp1Q69ZW3 1231 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Tmem132dQ76HP3 1097 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Iws1Q8C1D8 766 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Gramd4Q8CB44 633 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Mis12Q9CY25 206 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Llcfc1Q9D9P8 108 aa12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Ddx20Q9JJY4 825 aaKnown RBP12.4□□□□□ -0.42
Vps54-202ENSMUST00000109578 Hsf3D0VYS2 492 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Pik3r1P26450 724 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 OgdhQ60597 1023 aaKnown RBP12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Klra6Q60653 266 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ppp2r5cQ60996 524 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Q8BGD0 127 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Nop53Q8BK35 484 aaKnown RBP12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Mrgprx1Q8CIP3 322 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 4930449I24RikQ9D5E3 319 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Extl2Q9ES89 330 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Lypla2Q9WTL7 231 aa12.4□□□□□ -0.43
Vps54-202ENSMUST00000109578 Prl6a1O35257 230 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Q8BGN9 141 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Aldh5a1Q8BWF0 523 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Pkn2Q8BWW9 983 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Plekhg6Q8R0J1 787 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Slf1Q8R3P9 1054 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Zmynd10Q99ML0 440 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Fam205aA2APU8 1308 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 R3hdm4Q4VBF2 262 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 HnrnpdQ60668 355 aaKnown RBP12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Sp4Q62445 782 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Grhl1Q921D9 618 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Prl2b1Q9DAZ2 228 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Fyb2A2A995 729 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 IvlP48997 467 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Xlr3bQ6P205 226 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Fbxo38Q8BMI0 1194 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ythdf3Q8BYK6 585 aaKnown RBP12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Plcg2Q8CIH5 1265 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 IscuQ9D7P6 168 aa12.39□□□□□ -0.43
Vps54-202ENSMUST00000109578 Slc27a3O88561 667 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Sfi1Q3UZY0 1216 aaKnown RBP12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Abl2Q4JIM5 1182 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Pim2Q62070 370 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Slc26a6Q8CIW6 758 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ttc5Q99LG4 440 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Znf654Q9DAU9 571 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cacna2d3Q9Z1L5 1091 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Slc6a16A0A1L1SR47 742 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Mmrn1B2RPV6 1210 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cfap70D3YVL2 1141 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cacna2d1O08532 1103 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Map2k1P31938 393 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Tfe3Q64092 572 aaKnown RBP12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Ppfia2Q8BSS9 1257 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Xpo6Q924Z6 1125 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Tlr5Q9JLF7 859 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Grk1Q9WVL4 564 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Clrn2B2RVW2 232 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Gm4297D3YWB7 211 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Zfp266E9Q2S7 604 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Calb1P12658 261 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cyp11b2P15539 500 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Rnf113a2Q14B01 337 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Vwa3aQ3UVV9 1148 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Vps41Q5KU39 853 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Sorbs1Q62417 1290 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Epc2Q8C0I4 808 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Asb11Q9CQ31 323 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Cep19Q9CQA8 163 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Sdr42e1Q9D665 394 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Borcs6Q9D6W8 360 aa12.38□□□□□ -0.43
Vps54-202ENSMUST00000109578 Rnf103Q9R1W3 683 aa12.38□□□□□ -0.43
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms