RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Gm9268E9Q0M3 861 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Vmn2r62K7N712 859 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 PtpraP18052 829 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Rnf113a2Q14B01 337 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Acsbg2Q2XU92 667 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 PnocQ64387 187 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Anks6Q6GQX6 883 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Iws1Q8C1D8 766 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Tmem161bQ8C2L6 487 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 PpatQ8CIH9 517 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 DnerQ8JZM4 737 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Olr1Q9EQ09 363 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 IvdQ9JHI5 424 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gm28036V9GXJ1 658 aa16.83■□□□□ 0.28
Vcan-201ENSMUST00000109543 4930544D05RikJ3QK56 214 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Il27raO70394 623 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 PklrP53657 574 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Rhox12Q4TU81 186 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Spdye4aQ5IBH6 268 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Sorbs1Q62417 1290 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Sv2cQ69ZS6 727 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Rufy1Q8BIJ7 712 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Senp7Q8BUH8 1037 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Ttc22Q8C159 568 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Atp2a1Q8R429 994 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Calr3Q9D9Q6 380 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Astn1Q61137 1302 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gm14525B1AZA0 212 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gm2012B1B0R1 212 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Axin2O88566 840 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Cct5P80316 541 aaKnown RBP16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Col9a2Q07643 688 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Oog4Q4G0C7 502 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gm14819Q62478 212 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Sestd1Q80UK0 696 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Rnaseh2bQ80ZV0 308 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Spats2Q8K1N4 545 aaKnown RBP16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Lgi2Q8K4Z0 550 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Dnajc18Q9CZJ9 357 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Rasgef1cQ9D300 466 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Mipol1Q9D9F8 279 aa16.82■□□□□ 0.28
Vcan-201ENSMUST00000109543 Osbpl9A2A8Z1 736 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Zfp174B9EJW5 407 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 DgkkE9Q7N4 1118 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Per1O35973 1291 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 SfnO70456 248 aaKnown RBP16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Tarbp2P97473 365 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Pdlim7Q3TJD7 457 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gprin1Q3UNH4 932 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Sh3gl2Q62420 352 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Zcchc2Q69ZB8 1166 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 AdalQ80SY6 360 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Slc26a6Q8CIW6 758 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Ascc2Q91WR3 749 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Vps36Q91XD6 386 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Tmx2Q9D710 295 aaKnown RBP16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Rgs17Q9QZB0 210 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Slc35g2D3YVE8 412 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 AunipE9Q6Z5 340 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gm3127E9Q9P5 263 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gm21973F6WEZ7 68 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gm3453K7N724 263 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 SnrpfP62307 86 aaKnown RBP16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Ice2Q3UZ18 988 aaKnown RBP16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Gngt1Q61012 74 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Kctd6Q8BNL5 237 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Ccdc169Q8BXX9 214 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Ssr1Q9CY50 286 aaKnown RBP16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Capn9Q9D805 690 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Llcfc1Q9D9P8 108 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Megf6Q80V70 1572 aa16.81■□□□□ 0.28
Vcan-201ENSMUST00000109543 Zfp266E9Q2S7 604 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Cd70O55237 195 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 L1camP11627 1260 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Fgl2P12804 432 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Pla2g6P97819 807 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Rnpc3Q3UZ01 514 aaKnown RBP16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Bbof1Q3V079 533 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Tcf12Q61286 706 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Senp2Q91ZX6 588 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Dydc1Q9D9T0 175 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Atp2c2A7L9Z8 944 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Mms22lB1AUR6 1238 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Trim30cD3YVI9 513 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Scgb2b7D3YYY1 112 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Cdk14O35495 469 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Mgat1P27808 447 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Surf6P70279 355 aaKnown RBP16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Nr1d1Q3UV55 615 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Zrsr2Q62377 462 aaKnown RBP16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Trim6Q8BGE7 488 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Micall1Q8BGT6 870 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Olfml3Q8BK62 406 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Fbxo43Q8CDI2 640 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Fam228aQ8CDW1 299 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Usp27Q8CEG8 438 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Smc6Q924W5 1097 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Asb11Q9CQ31 323 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Sppl3Q9CUS9 384 aa16.8■□□□□ 0.28
Vcan-201ENSMUST00000109543 Ddx47Q9CWX9 455 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 22,080 RNA–protein pairs in 38.9 ms