RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 EgfrQ01279 1210 aa14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gm13103Q4VAD2 491 aa14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Usp17leQ7M764 540 aa14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Znf598Q80YR4 908 aaKnown RBP14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Rhot1Q8BG51 631 aa14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Lig4Q8BTF7 911 aa14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Unc45bQ8CGY6 931 aaKnown RBP14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Pnpt1Q8K1R3 783 aaKnown RBP14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ttc33Q9D6K7 262 aa14.83□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Kcna3P16390 528 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Skiv2lQ6NZR5 1244 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Hdac10Q6P3E7 666 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Spata32Q8C5V0 334 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Hacd3Q8K2C9 362 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Capn9Q9D805 690 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gm3182K7N6T8 263 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Cdh15P33146 784 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 TbckQ8BM85 762 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Olfr390Q8VEZ7 311 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Fip1l1Q9D824 581 aaKnown RBP14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Tmod3Q9JHJ0 352 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Zfp804bA0A0G2JGH6 1343 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gm28961A0A087WPA5 222 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gm21858A0A087WQ24 222 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Pms2P54279 859 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Afap1l2Q5DTU0 825 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 UrgcpQ5NCI0 926 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 ChukQ60680 745 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Trpc1Q61056 793 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ulbp1Q8HWA3 334 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 MypnQ5DTJ9 1315 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Supt3B0QZW4 406 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Slc35g2D3YVE8 412 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Cyp3a59D3Z2W7 503 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gm10639E9Q6L7 222 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 C130060K24RikG3UWA8 416 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gsta2P10648 222 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Mybl1P51960 751 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Dab1P97318 588 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Spag6Q3V0U9 509 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Olfml3Q8BK62 406 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 CenpuQ8C4M7 410 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Cpa5Q8R4H4 436 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Med21Q9CQ39 144 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Kdm6bQ5NCY0 1641 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gtpbp6Q3U6U5 514 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Avpr1aQ62463 423 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 E4f1Q8CCE9 783 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Rpa1Q8VEE4 623 aaKnown RBP14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Micu3Q9CTY5 523 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Syf2Q9D198 242 aaKnown RBP14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Serpinb6cW4VSP4 379 aa14.82□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Rap1gds1E9Q912 607 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 CatspereP0DP43 985 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Vps4bP46467 444 aaKnown RBP14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Chp1P61022 195 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Pcgf5Q3UK78 256 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ankrd34bQ3UUF8 508 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Papd5Q68ED3 633 aaKnown RBP14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gucy2gQ6TL19 1100 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Atp6v0d2Q80SY3 350 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Wdr60Q8C761 999 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ccdc80Q8R2G6 949 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Carmil3Q3UFQ8 1375 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Cyp4f17G3UW78 524 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Map4k1P70218 827 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Szrd1Q6NXN1 152 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ccdc85bQ6PDY0 202 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ankzf1Q80UU1 748 aaKnown RBP14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Trpm8Q8R4D5 1104 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Vps39Q8R5L3 886 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ces1fQ91WU0 561 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Cyp4f16Q99N17 524 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Chordc1Q9D1P4 331 aaKnown RBP14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Popdc2Q9ES82 367 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 A530032D15RikE9Q422 215 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Nmt2O70311 529 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 ItgaeQ60677 1167 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Svs3bQ8BZH8 265 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Xpo6Q924Z6 1125 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Mis18aQ9CZJ6 204 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Lrrc6O88978 473 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Msr1P30204 458 aaKnown RBP14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Dync1li2Q6PDL0 492 aaKnown RBP14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Clca2Q8BG22 942 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Chn1Q91V57 459 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Nt5c3aQ9D020 331 aa14.81□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Inpp1P49442 396 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Rps6kc1Q8BLK9 1056 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gm4871D3Z0W7 314 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Kifc3O35231 824 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Arhgap44Q5SSM3 814 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Ccdc130Q9D516 385 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Tmem47Q9JJG6 181 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Gja10Q9WUS4 505 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 6030498E09RikB1AX85 169 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Cfap52Q5F201 620 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Vil1Q62468 827 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Krt40Q6IFX3 439 aa14.8□□□□□ -0.04
Col3a1-201ENSMUST00000087883 Tlr13Q6R5N8 991 aa14.8□□□□□ -0.04
Retrieved 100 of 22,080 RNA–protein pairs in 56.1 ms