RNA–Protein interactions for RNA: ENSMUST00000062439.4

Ccdc54-201, Transcript of Coiled-coil domain-containing protein 54, mousemouse

APPRIS P1 BASIC

Gene Ccdc54, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc54-201ENSMUST00000062439 Igsf5Q7TSN7 370 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ube3cQ80U95 1083 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Llgl1Q80Y17 1036 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Zfp113Q8C689 439 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Ccdc87Q8CDL9 855 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Tram1l1Q8QZR0 363 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Iqsec1Q8R0S2 961 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Lims1Q99JW4 325 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Noxred1Q9D3S5 366 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Smok1Q9QYZ4 484 aa8.9□□□□□ -0.98
Ccdc54-201ENSMUST00000062439 Arap3Q8R5G7 1538 aa8.9□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Irs2P81122 1321 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Zmynd8A2A484 1235 aaKnown RBP8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Gm13941A2AJ38 245 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ajap1A2ALI5 412 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Tmf1B9EKI3 1091 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Zc3h7bF8VPP8 982 aaKnown RBP8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Mknk1O08605 427 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Slc16a2O70324 545 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ptpn21Q62136 1176 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ces1eQ64176 562 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 XpaQ64267 272 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Slc46a1Q6PEM8 459 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Rnf144bQ8BKD6 301 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Tarsl2Q8BLY2 790 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Pus7lQ8CE46 702 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Dmrtc2Q8CGW9 370 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Shtn1Q8K2Q9 631 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Cpa5Q8R4H4 436 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Tlr9Q9EQU3 1032 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Sv2aQ9JIS5 742 aa8.89□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ankrd36D3Z4K0 1415 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 DnmbpQ6TXD4 1580 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 FgaE9PV24 789 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Gm10036E9PYL9 178 aaKnown RBP8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 RradO88667 308 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 P01634 136 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Anxa1P10107 346 aaKnown RBP8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Art5P70352 309 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Gpr19Q61121 415 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Bcar1Q61140 874 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Dlg4Q62108 724 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ccpg1Q640L3 753 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Dnajc8Q6NZB0 253 aaKnown RBP8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ddx55Q6ZPL9 600 aaKnown RBP8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 PodnQ7TQ62 611 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Slc43a1Q8BSM7 564 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Tmem221Q8K071 230 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Rnf183Q8QZS5 190 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Hdac11Q91WA3 347 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Zdhhc13Q9CWU2 622 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Lonrf3Q9D4H7 753 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Sectm1bQ9JL59 212 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Itgb1bp2Q9R000 350 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Cep152A2AUM9 1736 aaKnown RBP8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ift172Q6VH22 1749 aa8.88□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Cdk13Q69ZA1 1511 aaKnown RBP8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Prr5lA2AVJ5 370 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Proca1B0QZF7 307 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Mn1D3YWE6 1297 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Zbtb10E9Q8X5 861 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Smad4P97471 551 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 2410002F23RikQ3TE80 284 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Leo1Q5XJE5 667 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Sptlc3Q8BG54 563 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 DseQ8BLI4 958 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Pithd1Q8BWR2 211 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Tmem143Q8VD26 458 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Xpo5Q924C1 1204 aaKnown RBP8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Stpg1Q9D2F5 341 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Efhd1Q9D4J1 240 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 CasrQ9QY96 1079 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Rims1Q99NE5 1463 aa8.87□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Rock1P70335 1354 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Kif20bQ80WE4 1774 aaKnown RBP8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Tulp4Q9JIL5 1547 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 A0A1W2P7S8 802 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 A0A1Y7VJH8 109 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Gm3233E9Q2H5 230 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Mdm4O35618 489 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Cyp2c37P56654 490 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Sparcl1P70663 650 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Ect2Q07139 913 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Fam170aQ66LM6 333 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Zswim5Q80TC6 1188 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Phldb2Q8K1N2 1249 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Nup133Q8R0G9 1155 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Eps8l1Q8R5F8 716 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Usp33Q8R5K2 909 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Clec2gQ9D676 269 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Zranb2Q9R020 330 aaKnown RBP8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Cdk5rap2Q8K389 1822 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Col14a1Q80X19 1797 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Pik3r4Q8VD65 1358 aa8.86□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Pik3c2aQ61194 1686 aa8.85□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Gm9920D3YVZ2 140 aa8.85□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Gm42957D6RFQ2 366 aa8.85□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 PspnO70300 156 aa8.85□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Dnmt3bO88509 859 aa8.85□□□□□ -0.99
Ccdc54-201ENSMUST00000062439 Hspa1lP16627 641 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms