RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Dlgap3Q6PFD5 977 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ccdc151Q8BSN3 593 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Fbxo18Q8K2I9 1042 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Lrrc9Q8CDN9 1456 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Akap10O88845 662 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Vsnl1P62761 191 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ddx55Q6ZPL9 600 aaKnown RBP16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 DnttP09838 530 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Gsdmc4Q3TR54 480 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ndufa5Q9CPP6 116 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Them5Q9CQJ0 248 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Nckap5lQ6GQX2 1323 aa16.61■□□□□ 0.25
Ubr3-201ENSMUST00000055758 FosP01101 380 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Krt76Q3UV17 594 aaKnown RBP16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ino80dQ66JY2 873 aaKnown RBP16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ginm1Q91WR6 327 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Mrpl28Q9D1B9 257 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Atp10dQ8K2X1 1416 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Sik3Q6P4S6 1311 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Serpinb2P12388 415 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ttll1Q91V51 423 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Adgrf5G5E8Q8 1348 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Smad5P97454 465 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 GgcxQ9QYC7 757 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ppm1aP49443 382 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 PltpP55065 493 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 S100gP97816 79 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Serpinb6dQ3UWK8 375 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Nars2Q8BGV0 477 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Parp14Q2EMV9 1817 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 CtcflA2APF3 636 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Gm5795E9PZN8 263 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 TwnkQ8CIW5 685 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Slc40a1Q9JHI9 570 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Tnni1Q9WUZ5 187 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Gm8879F6R3J9 157 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Stat5bP42232 786 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Serpina1eQ00898 413 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Zbtb8osQ505B7 168 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 KhnynQ80U38 671 aa16.6■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Zfp839E9PUU5 921 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Cd3dP04235 173 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Il15P48346 162 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Psmc6P62334 389 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Dynll1P63168 89 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Lrig2Q52KR2 1054 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Zbtb40Q6PCS8 1258 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ifi30Q9ESY9 248 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Gadd45gQ9Z111 159 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Trim30bE9PVL6 203 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Q14AM7 275 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ston1Q8CDJ8 730 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 SnrkQ8VDU5 748 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Ttf2Q5NC05 1138 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Tlr11Q6R5P0 926 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Gtf3c6Q9D8P7 227 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Nup50Q9JIH2 466 aaKnown RBP16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Rgs12Q8CGE9 1381 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Skint5A7XUY5 1461 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Gm8994E9PV04 411 aaKnown RBP16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Dhx40Q6PE54 779 aaKnown RBP16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Abi1Q8CBW3 481 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 XpotQ9CRT8 963 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Trim54Q9ERP3 366 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 FliiQ9JJ28 1271 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Kdm5cP41230 1554 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Rassf9Q8K342 435 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 PlvapQ91VC4 438 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Pramef20B1ARV6 477 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Trim63Q38HM4 350 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Zfp317Q8C0Q5 607 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 FlcnQ8QZS3 579 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Rpap2Q8VC34 614 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Setd3Q91WC0 594 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Dkk3Q9QUN9 349 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Chn2Q80XD1 332 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Chit1Q9D7Q1 464 aa16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Prpf4Q9DAW6 521 aaKnown RBP16.59■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Klc1O88447 541 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Pde4aO89084 844 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 PtsQ9R1Z7 144 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Gdf11Q9Z1W4 405 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Foxm1O08696 760 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Adssl1P28650 457 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Sfi1Q3UZY0 1216 aaKnown RBP16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 RpainQ9CWY9 219 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Adrm1Q9JKV1 407 aa16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Kif1bQ60575 1816 aaKnown RBP16.58■□□□□ 0.25
Ubr3-201ENSMUST00000055758 Prdm2A2A7B5 1709 aaKnown RBP16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Frmpd4A2AFR3 1320 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Lrrc6O88978 473 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Rpf1Q7TND5 349 aaKnown RBP16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Cdkl2Q9QUK0 568 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Mageb2A2AHM0 380 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 March10E9PX79 788 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 RnaselQ05921 735 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Oog4Q4G0C7 502 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Acap3Q6NXL5 833 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Mageb3Q9D2H4 330 aa16.58■□□□□ 0.24
Ubr3-201ENSMUST00000055758 Txnrd1Q9JMH6 613 aa16.58■□□□□ 0.24
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms