RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 GcP21614 476 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Sox13Q04891 613 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 E2f8Q58FA4 860 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Fgfr1opQ66JX5 399 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Lrig3Q6P1C6 1117 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Bank1Q80VH0 783 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Unc5bQ8K1S3 945 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Cnga3Q9JJZ8 631 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 GgcxQ9QYC7 757 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Osbpl7A2A716 963 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Itgb5O70309 798 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Cyp11b1Q3TG86 501 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Adcy2Q80TL1 1090 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Vgll2Q8BGW8 322 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Scfd2Q8BTY8 684 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 YwhabQ9CQV8 246 aaKnown RBP17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Rnf103Q9R1W3 683 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Tnip1Q9WUU8 647 aa17.3■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Proca1B0QZF7 307 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Rps6P62754 249 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Cul4aQ3TCH7 759 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Dab2ipQ3UHC7 1189 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Znf697Q569E7 569 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Zbtb17Q60821 794 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Spata16Q8C636 571 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Kiaa0391Q8JZY4 584 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 MyripQ8K3I4 856 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 PdhbQ9D051 359 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 MesdQ9ERE7 224 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Scn3aA2ASI5 1947 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Fam205aA2APU8 1308 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Hspa9P38647 679 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Pbxip1Q3TVI8 727 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Mybpc2Q5XKE0 1136 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 DcakdQ8BHC4 231 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 SetQ9EQU5 289 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Olfr552E9Q545 317 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 R3hdm1E9Q9Q2 1135 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Cdk14O35495 469 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Klrk1O54709 232 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Stk10O55098 966 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Lmnb1P14733 588 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Zcchc2Q69ZB8 1166 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Xpnpep1Q6P1B1 623 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Fam20aQ8CID3 541 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 SfpqQ8VIJ6 699 aaKnown RBP17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Coro7Q9D2V7 922 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Cul1Q9WTX6 776 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Extl3Q9WVL6 918 aa17.29■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Syt2P46097 422 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 IvlP48997 467 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Zdhhc24Q6IR37 284 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Znf830Q8R1N0 363 aaKnown RBP17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Sapcd2Q9D818 391 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Scgb2b20Q9JI02 112 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Ttll6A4Q9E8 822 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Pik3r1P26450 724 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Scaf8Q6DID3 1268 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Ppp2r5aQ6PD03 486 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 SpopQ6ZWS8 374 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Rps6ka6Q7TPS0 764 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Pcdhb12Q91Y07 789 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Spdl1Q923A2 608 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 NynrinQ5DTZ0 1840 aa17.28■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Gm15448F6PZL4 682 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Vmn2r77L7N2B7 854 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 MagohP61327 146 aaKnown RBP17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Ints8Q80V86 995 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Tmem117Q8BH18 514 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Lmo3Q8BZL8 145 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 MagohbQ9CQL1 146 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 IvdQ9JHI5 424 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Astn1Q61137 1302 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Atp2c2A7L9Z8 944 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 DgkhD3YXJ0 1156 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Wdr72D3YYM4 1114 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Dhx15O35286 795 aaKnown RBP17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Zmym1Q3TJB1 983 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Styk1Q6J9G1 429 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Sun2Q8BJS4 731 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Slc35f6Q8VE96 372 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Pramef12Q9D2F1 463 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Edf1Q9JMG1 148 aaKnown RBP17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Adam22Q9R1V6 904 aa17.27■□□□□ 0.36
Ckap4-201ENSMUST00000053871 Ttc6G3UYY4 1857 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Exoc4O35382 975 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Tp53P02340 387 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 VimP20152 466 aaKnown RBP17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Wnt10bP48614 389 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Rit2P70425 217 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ccdc169Q8BXX9 214 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Ppm1fQ8CGA0 452 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cpa5Q8R4H4 436 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Eif3hQ91WK2 352 aaKnown RBP17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Atp6v0a4Q920R6 833 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Gimap4Q99JY3 219 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Pls3Q99K51 630 aa17.27■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Cntnap5cQ0V8T7 1305 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Vps41Q5KU39 853 aa17.26■□□□□ 0.35
Ckap4-201ENSMUST00000053871 Dync1li2Q6PDL0 492 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 22,080 RNA–protein pairs in 55.8 ms