RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Ecel1Q9JMI0 775 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Slc26a4Q9R155 780 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Arhgap4B1AUY3 965 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Zfp94E9Q6Y4 486 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Bnip3O55003 187 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ccdc84Q4VA36 332 aaKnown RBP12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Foxd4Q60688 444 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Actn1Q7TPR4 892 aaKnown RBP12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Scrn2Q8VCA8 425 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Nek8Q91ZR4 698 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gps1Q99LD4 471 aaKnown RBP12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ska2Q9CR46 120 aa12.72□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gm13084A2A8N0 494 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Oog1E9Q5G7 496 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Sec24cG3X972 1096 aaKnown RBP12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Exoc7O35250 697 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 MafgO54790 162 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Slc3a2P10852 526 aaKnown RBP12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ercc5P35689 1170 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Akr1c14Q91WT7 323 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Rnf112Q96DY5 654 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ppil2Q9D787 521 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Fam205a1D3YZF6 1314 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Trmt10cQ3UFY8 414 aaKnown RBP12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Prl2c1Q5SVL9 228 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ppm1kQ8BXN7 372 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ascc2Q91WR3 749 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Llcfc1Q9D9P8 108 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gyg1Q9R062 333 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ifnb1P01575 182 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Ect2Q07139 913 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Runx2Q08775 607 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Arhgap15Q811M1 481 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Rhobtb2Q91V93 728 aa12.71□□□□□ -0.37
Pcif1-201ENSMUST00000041643 Gm8994E9PV04 411 aaKnown RBP12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm15448F6PZL4 682 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Magea8O89012 320 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Arhgef19Q8BWA8 802 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Eif3cQ8R1B4 911 aaKnown RBP12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Lonrf2B2RT44 518 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Casp2P29594 452 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Taf1bP97358 586 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Atp2a3Q64518 1038 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Bbs7Q8K2G4 715 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 EpgnQ924X1 152 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Slc5a4aQ9ET37 656 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rps6ka2Q9WUT3 733 aa12.71□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Trim43aQ3TL54 445 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Cct6bQ61390 531 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Sept10Q8C650 452 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ccdc65Q8VHI7 493 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 MyocdQ8VIM5 935 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tex19.1Q99MV2 351 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nsmce1Q9D720 266 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Nudt5Q9JKX6 218 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Becn2P0DM65 447 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Olfr121Q5CZY0 321 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 PhkbQ7TSH2 1085 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Trim47Q8C0E3 641 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Epc2Q8C0I4 808 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ppp4r4Q8C0Y0 875 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Reep2Q8VCD6 254 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mageb16Q9CWV4 363 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 BcamQ9R069 622 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Arhgef26D3YYY8 869 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Fam129cD3YZB0 591 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Sin3bQ62141 1098 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Pum3Q8BKS9 647 aaKnown RBP12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Inpp5bQ8K337 993 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 AdigQ8R400 80 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ces1fQ91WU0 561 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 4930449I24RikQ9D5E3 319 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ppef2O35385 757 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Atp8a1P70704 1164 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 SelpQ01102 768 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tatdn3Q3U1C6 294 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ccdc33Q3ULW6 985 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Klrg2Q3UM83 387 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ano5Q75UR0 904 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Taco1Q8K0Z7 294 aaKnown RBP12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Bhmt2Q91WS4 363 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Slc2a5Q9WV38 501 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Snx1Q9WV80 522 aa12.7□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mdm4O35618 489 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Rhox12Q4TU81 186 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tbc1d10cQ8C9V1 444 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Ube2sQ921J4 223 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Gm5114W4VSN8 858 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Brwd3A2AHJ4 1799 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Bend4P86174 541 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Plekha7Q3UIL6 1118 aaKnown RBP12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Best2Q8BGM5 508 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Snx14Q8BHY8 964 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 MgarpQ8VI64 283 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tmem192Q9CXT7 266 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 PpihQ9D868 188 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Dkc1Q9ESX5 509 aaKnown RBP12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Tcp10bE9PYJ0 438 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Mybl1P51960 751 aa12.69□□□□□ -0.38
Pcif1-201ENSMUST00000041643 Zhx1P70121 873 aa12.69□□□□□ -0.38
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms