RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Bcat1P24288 386 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ranbp1P34022 203 aaKnown RBP9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 LxnP70202 222 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tex35Q14BK3 207 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Capn13Q3UW68 665 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Dph1Q5NCQ5 438 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rnaseh2bQ80ZV0 308 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ptrh1Q8BW00 204 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Sulf1Q8K007 870 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Vps37cQ8R105 352 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ivns1abpQ920Q8 642 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 ThegQ9JMB1 375 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fam205aA2APU8 1308 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm8994E9PV04 411 aaKnown RBP9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Hoxa11P31311 313 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 GmpsQ3THK7 693 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ogfod1Q3U0K8 545 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Msantd2Q6NZR2 559 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Snx19Q6P4T1 997 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Atp6v0d2Q80SY3 350 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cnksr2Q80YA9 1032 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Lonp1Q8CGK3 949 aaKnown RBP9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tmem206Q9D771 350 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cnot8Q9D8X5 292 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Efna5O08543 228 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 MybP06876 636 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Wnt10bP48614 389 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Srrm3Q80WV7 648 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Skor1Q8BX46 964 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Spata16Q8C636 571 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Lpin2Q99PI5 893 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ecel1Q9JMI0 775 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 B3galt4Q9Z0F0 371 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Mtmr1Q9Z2C4 669 aa9.11□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Mmrn1B2RPV6 1210 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Slc35g2D3YVE8 412 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Serpinb3aG3X9V8 387 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Kcnk16G5E845 292 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Slc16a2O70324 545 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fgl2P12804 432 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Atf2P16951 487 aaKnown RBP9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Pla2g6P97819 807 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cnot7Q60809 285 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Arhgap4B1AUY3 965 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Krt19P19001 403 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Klra5Q60652 266 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Zbtb5Q7TQG0 670 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Zfyve19Q9DAZ9 389 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gadd45gQ9Z111 159 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Col5a2Q3U962 1497 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cntnap5cQ0V8T7 1305 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gcnt4E9Q649 455 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 AoahO35298 574 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ccnd2P30280 289 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Foxp2P58463 714 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 rp9P97762 213 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Dact3Q0PHV7 610 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm10392Q3V3I3 114 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Krt12Q64291 487 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Nacc1Q7TSZ8 514 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ints2Q80UK8 1198 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Senp7Q8BUH8 1037 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Calcoco1Q8CGU1 691 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Dact1Q8R4A3 778 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Nmrk1Q91W63 195 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Rpn1Q91YQ5 608 aaKnown RBP9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Arhgef25Q9CWR0 618 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 MlklQ9D2Y4 472 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm11983V9GXS8 105 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 DgkkE9Q7N4 1118 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Adcy8P97490 1249 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 NfibP97863 570 aaKnown RBP9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Miga1Q4QQM5 600 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ano5Q75UR0 904 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Fnbp1Q80TY0 616 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 GopcQ8BH60 463 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 ArpinQ9D0A3 226 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 March8Q9DBD2 286 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Krt71Q9R0H5 524 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gdap1O88741 358 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 VimP20152 466 aaKnown RBP9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Cdc25cP48967 447 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Tmod1P49813 359 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Neurog2P70447 263 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Atp11aP98197 1187 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Smarcad1Q04692 1021 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Atp13a4Q5XF90 1193 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Pcsk7Q61139 770 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Znf579Q80VM4 562 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Slc4a7Q8BTY2 1034 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Mettl24Q8CCB5 363 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Kdm4bQ91VY5 1086 aa9.1□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Gm44503E9PYU5 387 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Itgb5O70309 798 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Diaph2O70566 1098 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ifnb1P01575 182 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Mucl2P02815 138 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 ZfxP17012 799 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Ercc5P35689 1170 aa9.09□□□□□ -0.95
Sf3b1-201ENSMUST00000027127 Pde1bQ01065 535 aa9.09□□□□□ -0.95
Retrieved 100 of 22,080 RNA–protein pairs in 25.8 ms