RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Gins2Q9D600 185 aa15.28■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cdc42bpgQ80UW5 1551 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tmc5Q32NZ6 967 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Mtrf1Q8K126 446 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Znf445Q8R2V3 986 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Trmt112Q9DCG9 125 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Rassf7Q9DD19 359 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Atp10aO54827 1508 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 CoilQ5SU73 570 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 CybbQ61093 570 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ces1eQ64176 562 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Znf219Q6IQX8 726 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Tspyl4Q8VD63 406 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Slc2a5Q9WV38 501 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Ets1P27577 440 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 TfamP40630 243 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Atp11aP98197 1187 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cab39Q06138 341 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 H2afyQ9QZQ8 372 aaKnown RBP15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Kif20bQ80WE4 1774 aaKnown RBP15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Cacna1cQ01815 2139 aa15.27■□□□□ 0.04
Col7a1-201ENSMUST00000026740 Gm4871D3Z0W7 314 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Adck2Q6NSR3 617 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Fbxo9Q8BK06 437 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Alpk1Q9CXB8 1231 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 PycardQ9EPB4 193 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 RalbQ9JIW9 206 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Gm21488A0A087WR99 222 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Psmb9P28076 219 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Mcl1P97287 331 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Heatr3Q8BQM4 679 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Klhl11Q8CE33 709 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Wdr24Q8CFJ9 790 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 B3galt6Q91Z92 325 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Pde8bE9Q4S1 865 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 DffaO54786 331 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Serpina1aP07758 413 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Sipa1P46062 1037 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 HpcaP84075 193 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Serpina1cQ00896 412 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Serpina1dQ00897 413 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Znf280dQ68FE8 974 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Tlk1Q8C0V0 766 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Eif4enif1Q9EST3 983 aaKnown RBP15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ccdc144bE9PVZ3 520 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Casp12O08736 419 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ddr2Q62371 854 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Q8BP99 230 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Epc1Q8C9X6 813 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Cog3Q8CI04 820 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Creld2Q9CYA0 350 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Clic4Q9QYB1 253 aa15.27■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Hmgxb3G3X9M3 1254 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Klc2O88448 599 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 S100a6P14069 89 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Serpina1eQ00898 413 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Bcap31Q61335 245 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Plekha8Q80W71 519 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Mfap3lQ9D3X9 409 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ifi35Q9D8C4 286 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Carmil3Q3UFQ8 1375 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ppef2O35385 757 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 OsbpQ3B7Z2 805 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Orc2Q60862 576 aaKnown RBP15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Gga3Q8BMI3 718 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 N4bp3Q8C7U1 537 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Abcf3Q8K268 709 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Arhgef11Q68FM7 1552 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Fam167aQ6P1G6 215 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ttll4Q80UG8 1193 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Dnm3Q8BZ98 863 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Msi2Q920Q6 346 aaKnown RBP15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Apba1B2RUJ5 842 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Fam160a1Q505K2 1081 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Arhgap26Q6ZQ82 814 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Kcns3Q8BQZ8 491 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Yars2Q8BYL4 472 aaKnown RBP15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ppp6r2Q8R3Q2 923 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Atl2Q6PA06 583 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Castor1Q9CWQ8 331 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 4930469K13RikA0A286YDB2 92 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Pdha1P35486 390 aaKnown RBP15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 SpdyaQ5IBH7 310 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 GanQ8CA72 597 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Trim31Q8R0K2 507 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 IkbipQ9DBZ1 373 aa15.26■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Ext2P70428 718 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Xxylt1Q3U4G3 392 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Nod1Q8BHB0 953 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Tmem119Q8R138 280 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rps6kb2Q9Z1M4 485 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 CatspereP0DP43 985 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Rbm46P86049 533 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Fnbp1Q80TY0 616 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Tbc1d22bQ80VE5 505 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 LRWD1Q8BUI3 648 aaKnown RBP15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Vmn1r213Q8R278 384 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Fbxw7Q8VBV4 629 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 Tubgcp4Q9D4F8 667 aa15.25■□□□□ 0.03
Col7a1-201ENSMUST00000026740 A0A1Y7VP24 259 aa15.25■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 13.6 ms