RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Gm5926E9PWJ8 236 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 NppbP40753 121 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 BlmhQ8R016 455 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Setd6Q9CWY3 473 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Nudt12Q9DCN1 462 aa13.65□□□□□ -0.22
Clcn3-201ENSMUST00000004430 Pagr1bF6V0H0 108 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Lig1P37913 916 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 ClgnP52194 611 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 SowahdQ8BY98 327 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Apbb1ipQ8R5A3 670 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Pagr1aQ99L02 253 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Q9DAQ4 598 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cyth3O08967 399 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Exoc4O35382 975 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nol4P60954 483 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Wdr41Q3UDP0 460 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 OcrlQ6NVF0 900 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cep57Q8CEE0 500 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ophn1Q99J31 802 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nphs1Q9QZS7 1256 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Adam22Q9R1V6 904 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Fyb2A2A995 729 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Klhl41A2AUC9 606 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm3415J3QMS8 315 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Nr1i3O35627 358 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 FosP01101 380 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ppp2r5cQ60996 524 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Naif1Q6PFD7 327 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Tdpoz4Q6YCH2 370 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Fsd1lQ8BYN5 507 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ccdc137Q8R0K4 290 aaKnown RBP13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Bbs5Q9CZQ9 341 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm3404Q9D506 307 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Pard6bQ9JK83 371 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Brwd3A2AHJ4 1799 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Col22a1E9Q7P1 1613 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm5795E9PZN8 263 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm3893E9Q1I1 302 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Sult1d1Q3UZZ6 295 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Mcf2lQ64096 1149 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 SnphQ80U23 495 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ildr1Q8CBR1 537 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Actl9Q8CG27 415 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Fgfr1op2Q9CRA9 253 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Mrps22Q9CXW2 359 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gins2Q9D600 185 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Usp31E9Q6Y8 1344 aa13.64□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Zfp839E9PUU5 921 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ccdc175E9PVB3 822 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Thumpd3P97770 505 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 EgfrQ01279 1210 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ugt1a9Q62452 528 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 GnptabQ69ZN6 1235 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Mettl25Q6NXH8 597 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Kcnv2Q8CFS6 562 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Slc44a4Q91VA1 707 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ddx24Q9ESV0 857 aaKnown RBP13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 BcamQ9R069 622 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Hebp1Q9R257 190 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Zc3h7bF8VPP8 982 aaKnown RBP13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Psmc4P54775 418 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Psmc6P62334 389 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ccdc84Q4VA36 332 aaKnown RBP13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Vmn1r209Q5NC97 312 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 PaoxQ8C0L6 504 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 SucoQ8C341 1250 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Mtmr4Q91XS1 1190 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ddah1Q9CWS0 285 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rfwd2Q9R1A8 733 aaKnown RBP13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Mzf1S4R1L6 814 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm13023A2A8N2 498 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Itpripl1A2ASA8 547 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rab20P35295 233 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 InhbaQ04998 424 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Acsbg2Q2XU92 667 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rrp36Q3UFY0 244 aaKnown RBP13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Snx25Q3ZT31 840 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Fbxw10Q5SUS0 1030 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Pim2Q62070 370 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Kcns3Q8BQZ8 491 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Acat1Q8QZT1 424 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Trpm8Q8R4D5 1104 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Scgb2b20Q9JI02 112 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Caln1Q9JJG7 219 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Crlf3Q9Z2L7 442 aa13.63□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Gm3182K7N6T8 263 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Prkg1P0C605 671 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rsad1Q5SUV1 442 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Sh3gl3Q62421 347 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Rab34Q64008 259 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Snip1Q8BIZ6 383 aaKnown RBP13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Igdcc3Q8BQC3 813 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Trim35Q8C006 501 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Kbtbd4Q8R179 534 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Krt5Q922U2 580 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Cdc26Q99JP4 85 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 IkbipQ9DBZ1 373 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Zmym2Q9CU65 1376 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 Ptpn12P35831 775 aa13.62□□□□□ -0.23
Clcn3-201ENSMUST00000004430 4930502E18RikQ14BQ3 236 aa13.62□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 37.7 ms