RNA–Protein interactions for RNA: YIL042C

PKP1, Transcript of Mitochondrial protein kinase, yeast

Gene PKP1, Length 1,185 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKP1	YIL042C	FOL3	Q12676	427 aa	Predicted RBP	13.91	□□□□□ -0.18
PKP1	YIL042C	RHO1	P06780	209 aa	Known RBP	13.9	□□□□□ -0.18
PKP1	YIL042C	HAP4	P14064	554 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	YKL077W	P36081	392 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	SEN34	P39707	275 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	SPO73	P40031	143 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	YJR098C	P47139	656 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	MON1	P53129	644 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	PRM8	P53174	237 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	SNT309	Q06091	175 aa	Predicted RBP	13.9	□□□□□ -0.18
PKP1	YIL042C	YLR126C	Q12288	251 aa		13.9	□□□□□ -0.18
PKP1	YIL042C	HEM4	P06174	275 aa		13.89	□□□□□ -0.19
PKP1	YIL042C	PEP4	P07267	405 aa	Known RBP	13.89	□□□□□ -0.19
PKP1	YIL042C	MCM1	P11746	286 aa		13.89	□□□□□ -0.19
PKP1	YIL042C	NUP1	P20676	1076 aa		13.89	□□□□□ -0.19
PKP1	YIL042C	PTP2	P29461	750 aa		13.89	□□□□□ -0.19
PKP1	YIL042C	MRPL6	P32904	214 aa		13.89	□□□□□ -0.19
PKP1	YIL042C	CHK1	P38147	527 aa		13.89	□□□□□ -0.19
PKP1	YIL042C	LYS5	P50113	272 aa		13.89	□□□□□ -0.19
PKP1	YIL042C	YPR147C	Q06522	304 aa	Known RBP	13.89	□□□□□ -0.19
PKP1	YIL042C	SNF4	P12904	322 aa		13.88	□□□□□ -0.19
PKP1	YIL042C	SBA1	P28707	216 aa	Known RBP	13.88	□□□□□ -0.19
PKP1	YIL042C	YKL071W	P36086	256 aa		13.88	□□□□□ -0.19
PKP1	YIL042C	MRPL39	P36533	70 aa		13.88	□□□□□ -0.19
PKP1	YIL042C	AIM3	P38266	947 aa	Known RBP	13.88	□□□□□ -0.19
PKP1	YIL042C	YGR016W	P53209	190 aa		13.88	□□□□□ -0.19
PKP1	YIL042C	COQ11	Q05892	277 aa		13.88	□□□□□ -0.19
PKP1	YIL042C	YPL191C	Q08930	360 aa		13.88	□□□□□ -0.19
PKP1	YIL042C	YAK1	P14680	807 aa		13.87	□□□□□ -0.19
PKP1	YIL042C	PUP2	P32379	260 aa		13.87	□□□□□ -0.19
PKP1	YIL042C	SIC1	P38634	284 aa		13.87	□□□□□ -0.19
PKP1	YIL042C	CTF8	P38877	133 aa		13.87	□□□□□ -0.19
PKP1	YIL042C	GDI1	P39958	451 aa	Known RBP	13.87	□□□□□ -0.19
PKP1	YIL042C	NIP7	Q08962	181 aa	Known RBP	13.87	□□□□□ -0.19
PKP1	YIL042C	YDL176W	Q12027	708 aa		13.87	□□□□□ -0.19
PKP1	YIL042C	YHL037C	P38733	133 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	13.86	□□□□□ -0.19	not detected
PKP1	YIL042C	KRE29	P40026	464 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	IRC7	P43623	340 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	HMS2	P47175	358 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	ASI2	P53895	289 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	ASI1	P54074	624 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	YMR265C	Q03508	461 aa	Known RBP	13.86	□□□□□ -0.19
PKP1	YIL042C	RAF1	Q06891	181 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	VIK1	Q12045	647 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	SPC3	Q12133	184 aa		13.86	□□□□□ -0.19
PKP1	YIL042C	DPM1	P14020	267 aa	Known RBP	13.85	□□□□□ -0.19
PKP1	YIL042C	TFS1	P14306	219 aa		13.85	□□□□□ -0.19
PKP1	YIL042C	UBC8	P28263	218 aa		13.85	□□□□□ -0.19
PKP1	YIL042C	PRE2	P30656	287 aa	Known RBP	13.85	□□□□□ -0.19
PKP1	YIL042C	THI4	P32318	326 aa		13.85	□□□□□ -0.19
PKP1	YIL042C	NIC96	P34077	839 aa		13.85	□□□□□ -0.19
PKP1	YIL042C	MAE1	P36013	669 aa	Known RBP	13.85	□□□□□ -0.19
PKP1	YIL042C	FAR7	P43592	221 aa		13.85	□□□□□ -0.19
PKP1	YIL042C	DBP10	Q12389	995 aa	Known RBP	13.85	□□□□□ -0.19
PKP1	YIL042C	CDC3	P32457	520 aa	Known RBP	13.84	□□□□□ -0.19
PKP1	YIL042C	PRP19	P32523	503 aa	Known RBP	13.84	□□□□□ -0.19
PKP1	YIL042C	SOF1	P33750	489 aa	Known RBP	13.84	□□□□□ -0.19
PKP1	YIL042C	YGP1	P38616	354 aa	Known RBP	13.84	□□□□□ -0.19
PKP1	YIL042C	DAM1	P53267	343 aa		13.84	□□□□□ -0.19
PKP1	YIL042C	KAP120	Q02932	1032 aa		13.84	□□□□□ -0.19
PKP1	YIL042C	DML1	Q03652	475 aa		13.84	□□□□□ -0.19
PKP1	YIL042C	SNO4	Q04902	237 aa		13.84	□□□□□ -0.19
PKP1	YIL042C	HRT1	Q08273	121 aa		13.84	□□□□□ -0.19
PKP1	YIL042C	HSP33	Q08914	237 aa	Known RBP	13.84	□□□□□ -0.19
PKP1	YIL042C	HSP32	Q08992	237 aa		13.84	□□□□□ -0.19
PKP1	YIL042C	YDL180W	Q12301	547 aa		13.84	□□□□□ -0.19
PKP1	YIL042C	MET2	P08465	486 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	AST1	P35183	429 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	YAR028W	P39548	234 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	CHA4	P43634	648 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	FMP33	P46998	180 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	MKC7	P53379	596 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	MRPL19	P53875	158 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	ABZ2	Q03266	374 aa		13.83	□□□□□ -0.2
PKP1	YIL042C	DTD1	Q07648	150 aa	Known RBP	13.83	□□□□□ -0.2
PKP1	YIL042C	UTP20	P35194	2493 aa	Known RBP	13.82	□□□□□ -0.2
PKP1	YIL042C	MCM10	P32354	571 aa		13.82	□□□□□ -0.2
PKP1	YIL042C	CYS4	P32582	507 aa	Known RBP	13.82	□□□□□ -0.2
PKP1	YIL042C	MTR2	P34232	184 aa	Known RBP	13.82	□□□□□ -0.2
PKP1	YIL042C	MRPL16	P38064	232 aa		13.82	□□□□□ -0.2
PKP1	YIL042C	FET3	P38993	636 aa		13.82	□□□□□ -0.2
PKP1	YIL042C	GPP1	P41277	250 aa	Known RBP	13.82	□□□□□ -0.2
PKP1	YIL042C	IDS2	P46958	469 aa		13.82	□□□□□ -0.2
PKP1	YIL042C	ADO1	P47143	340 aa	Known RBP	13.82	□□□□□ -0.2
PKP1	YIL042C	COS1	P53822	381 aa		13.82	□□□□□ -0.2
PKP1	YIL042C	MRL1	Q06815	381 aa		13.82	□□□□□ -0.2
PKP1	YIL042C	RIB3	Q99258	208 aa		13.82	□□□□□ -0.2
PKP1	YIL042C	SPS100	P13130	326 aa		13.81	□□□□□ -0.2
PKP1	YIL042C	PRP28	P23394	588 aa		13.81	□□□□□ -0.2
PKP1	YIL042C	POL4	P25615	582 aa		13.81	□□□□□ -0.2
PKP1	YIL042C	PAD1	P33751	242 aa	Known RBP RIP-Chip data	13.81	□□□□□ -0.2	not detected
PKP1	YIL042C	STB1	P42845	420 aa		13.81	□□□□□ -0.2
PKP1	YIL042C	PCP1	P53259	346 aa		13.81	□□□□□ -0.2
PKP1	YIL042C	RSM24	Q03976	319 aa		13.81	□□□□□ -0.2
PKP1	YIL042C	SIA1	Q12212	622 aa		13.81	□□□□□ -0.2
PKP1	YIL042C	AHP1	P38013	176 aa	Known RBP	13.8	□□□□□ -0.2
PKP1	YIL042C	YFL051C	P43552	160 aa		13.8	□□□□□ -0.2
PKP1	YIL042C	MDE1	P47095	244 aa		13.8	□□□□□ -0.2
PKP1	YIL042C	EXG2	P52911	562 aa		13.8	□□□□□ -0.2

Retrieved 100 of 5,963 RNA–protein pairs in 98.7 ms