RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 ZNF720Q7Z2F6 126 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 TMC6Q7Z403 805 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 MCPH1Q8NEM0 835 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 GLG1Q92896 1179 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 FAM167AQ96KS9 214 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 ATP6V0A4Q9HBG4 840 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 GPRC5CQ9NQ84 441 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 PDLIM7Q9NR12 457 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 TAB2Q9NYJ8 693 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 NRBP1Q9UHY1 535 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 PCDHB13Q9Y5F0 798 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 DNAH12Q6ZR08 3092 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 MCM3APO60318 1980 aa14.43□□□□□ -0.1
PHGDH-221ENST00000641573 EMSYQ7Z589 1322 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 C11orf97A0A1B0GVM6 126 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 K7ENM7 598 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 PDXKO00764 312 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 CALUO43852 315 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 SMPD1P17405 629 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 ATN1P54259 1190 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 FKBP3Q00688 224 aaKnown RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 CCDC144BQ3MJ40 725 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 ZC2HC1CQ53FD0 456 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 TJAP1Q5JTD0 557 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 IQSEC1Q6DN90 963 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 LRRC55Q6ZSA7 311 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 CCDC186Q7Z3E2 898 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 VSTM4Q8IW00 320 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 KIFAP3Q92845 792 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 EMID1Q96A84 441 aaPredicted RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 CNOT6LQ96LI5 555 aaKnown RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 APBA2Q99767 749 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 STRA6Q9BX79 667 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 VPS16Q9H269 839 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 RTN4Q9NQC3 1192 aaKnown RBP14.42□□□□□ -0.1
PHGDH-221ENST00000641573 XPNPEP1Q9NQW7 623 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 FLRT1Q9NZU1 646 aa14.42□□□□□ -0.1
PHGDH-221ENST00000641573 N4BP3O15049 544 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 NKRFO15226 690 aaKnown RBP eCLIP14.41□□□□□ -0.1
PHGDH-221ENST00000641573 TEX33O43247 280 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 PPP1R37O75864 691 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 MARK3P27448 753 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 MTIF2P46199 727 aaKnown RBP14.41□□□□□ -0.1
PHGDH-221ENST00000641573 POLGP54098 1239 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-221ENST00000641573 PEX3P56589 373 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 ALCAMQ13740 583 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 EMC2Q15006 297 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 SHHQ15465 462 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 TARBP2Q15633 366 aaKnown RBP14.41□□□□□ -0.1
PHGDH-221ENST00000641573 CCL14Q16627 93 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 PTPN21Q16825 1174 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 EDRF1Q3B7T1 1238 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 DUSP28Q4G0W2 176 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 PRAMEF19Q5SWL8 479 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 OLFML2BQ68BL8 750 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 FILIP1Q7Z7B0 1213 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 TRIM50Q86XT4 487 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 ZC3H3Q8IXZ2 948 aaKnown RBP14.41□□□□□ -0.1
PHGDH-221ENST00000641573 ATP8B4Q8TF62 1192 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 BBXQ8WY36 941 aaPredicted RBP14.41□□□□□ -0.1
PHGDH-221ENST00000641573 EEF2KMTQ96G04 330 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 CEP63Q96MT8 703 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 CEP89Q96ST8 783 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 SMARCAD1Q9H4L7 1026 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 TYW1Q9NV66 732 aaKnown RBP14.41□□□□□ -0.1
PHGDH-221ENST00000641573 IMPACTQ9P2X3 320 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 TRAF3IP3Q9Y228 551 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 PPME1Q9Y570 386 aa14.41□□□□□ -0.1
PHGDH-221ENST00000641573 RFC5P40937 340 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 SLC26A2P50443 739 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 NCKAP1LP55160 1127 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 RTP1P59025 263 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 SMAD3P84022 425 aaKnown RBP14.4□□□□□ -0.1
PHGDH-221ENST00000641573 KCNA1Q09470 495 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 PLCB4Q15147 1175 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 KSR1Q8IVT5 923 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 OR6J1Q8NGC5 347 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 PPTC7Q8NI37 304 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 AFG1LQ8WV93 481 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 ZNF830Q96NB3 372 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-221ENST00000641573 TUBGCP2Q9BSJ2 902 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 POLR3FQ9H1D9 316 aaPredicted RBP14.4□□□□□ -0.1
PHGDH-221ENST00000641573 ST6GALNAC4Q9H4F1 302 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 DHX33Q9H6R0 707 aaKnown RBP14.4□□□□□ -0.1
PHGDH-221ENST00000641573 ATP11BQ9Y2G3 1177 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 WDR81Q562E7 1941 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 ARID2Q68CP9 1835 aa14.4□□□□□ -0.1
PHGDH-221ENST00000641573 ZMYM2Q9UBW7 1377 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 CCDC169A6NNP5 214 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 CETN3O15182 167 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 SLC16A4O15374 487 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 TGFB1I1O43294 461 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 MSCO60682 206 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 GNA14O95837 355 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 LGALS2P05162 132 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 TPM2P07951 284 aa14.39□□□□□ -0.11
PHGDH-221ENST00000641573 ZNF865P0CJ78 1059 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-221ENST00000641573 PRKCSHP14314 528 aaPredicted RBP14.39□□□□□ -0.11
PHGDH-221ENST00000641573 CNGA1P29973 690 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms