RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 DRP2Q13474 957 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 KIAA0753Q2KHM9 967 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 ABCB5Q2M3G0 1257 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 RNF168Q8IYW5 571 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 ZBED3Q96IU2 234 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 FGFR1OP2Q9NVK5 253 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 PGAP2Q9UHJ9 254 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 BZW2Q9Y6E2 419 aaKnown RBP12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 ZNF189O75820 626 aaPredicted RBP12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 ECE1P42892 770 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 ICA1Q05084 483 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 DPYDQ12882 1025 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 CREG2Q8IUH2 290 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 OGFOD1Q8N543 542 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 ZNF579Q8NAF0 562 aaKnown RBP12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 CCDC17Q96LX7 622 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 CYTH2Q99418 400 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 TRIM7Q9C029 511 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 EXOC1Q9NV70 894 aa12.81□□□□□ -0.36
RBFOX1-224ENST00000641259 PRCPP42785 496 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 RPS6KA1Q15418 735 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 GLE1Q53GS7 698 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 UPF1Q92900 1129 aaKnown RBP eCLIP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 CELF4Q9BZC1 486 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 AZI2Q9H6S1 392 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 SEC63Q9UGP8 760 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 NQO1P15559 274 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 KLC1Q07866 573 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 FAM114A1Q8IWE2 563 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 MKL1Q969V6 931 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 XPO6Q96QU8 1125 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 CNOT8Q9UFF9 292 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 PP2D1A8MPX8 630 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 SMARCA1P28370 1054 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 PAPD7Q5XG87 772 aaKnown RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 CCDC84Q86UT8 332 aaPredicted RBP12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 HPS3Q969F9 1004 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 LMCD1Q9NZU5 365 aa12.8□□□□□ -0.36
RBFOX1-224ENST00000641259 YY1P25490 414 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 SLC1A4P43007 532 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 ITGB3BPQ13352 177 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 SETDB1Q15047 1291 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 ZRSR2Q15696 482 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 C11orf91Q3C1V1 193 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 DENND2CQ68D51 928 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 TMEM179Q6ZVK1 233 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 HOOK3Q86VS8 718 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 TRIML1Q8N9V2 468 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 AGBL3Q8NEM8 1001 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 FAM81AQ8TBF8 368 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 VPS33BQ9H267 617 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 MYOZ2Q9NPC6 264 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 NYAP2Q9P242 653 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 NPHP3-ACAD11A0A0J9YXS1 232 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 CCDC194A0A1B0GVG4 234 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 TCP11X1B4DZS4 312 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 SMNDC1O75940 238 aaKnown RBP eCLIP12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 RTN3O95197 1032 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 KRT16P08779 473 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 PDE4DQ08499 809 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 UBE2SQ16763 222 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 CWF19L1Q69YN2 538 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 CAPN12Q6ZSI9 719 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 PPFIBP2Q8ND30 876 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 CEP70Q8NHQ1 597 aa12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 MMADHCQ9H3L0 296 aaPredicted RBP12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 DBR1Q9UK59 544 aaKnown RBP12.79□□□□□ -0.36
RBFOX1-224ENST00000641259 SPDYE3A6NKU9 549 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 SUN1O94901 812 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 VPS41P49754 854 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 RBM26Q5T8P6 1007 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 CIAPIN1Q6FI81 312 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 PPP4R3AQ6IN85 833 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 CCHCR1Q8TD31 782 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 ACER1Q8TDN7 264 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 FAM151AQ8WW52 585 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 MTMR8Q96EF0 704 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 TMEM237Q96Q45 408 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 KLHL14Q9P2G3 628 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 LIMA1Q9UHB6 759 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 HDAC9Q9UKV0 1011 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 F5H6K3 240 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 TRAPPC3O43617 180 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 SUPT3HO75486 399 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 FGFR1OPO95684 399 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 TRAPPC10P48553 1259 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 COG7P83436 770 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 KLRC3Q07444 240 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 SLFN13Q68D06 897 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 MIPOL1Q8TD10 442 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 MORC4Q8TE76 937 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 LRRC15Q8TF66 581 aa12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 GLIS2Q9BZE0 524 aaPredicted RBP12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 UTP11Q9Y3A2 253 aaKnown RBP12.78□□□□□ -0.36
RBFOX1-224ENST00000641259 ZC3H4Q9UPT8 1303 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms