RNA–Protein interactions for RNA: ENST00000640499.1

VEGFA-231, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFA, Length 1,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-231ENST00000640499 ASAP2O43150 1006 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 TLL1O43897 1013 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 UPP2O95045 317 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 BRD1O95696 1058 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 ZRSR1Q15695 479 aaKnown RBP29.67■■■□□ 2.34
VEGFA-231ENST00000640499 SPECC1Q5M775 1068 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 ZNF697Q5TEC3 545 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 LINC00301Q8NCQ3 95 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 CCDC43Q96MW1 224 aaKnown RBP29.67■■■□□ 2.34
VEGFA-231ENST00000640499 RAD9AQ99638 391 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 ADAM2Q99965 735 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 POLR3FQ9H1D9 316 aaPredicted RBP29.67■■■□□ 2.34
VEGFA-231ENST00000640499 ZNF576Q9H609 170 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 DNM3Q9UQ16 869 aa29.67■■■□□ 2.34
VEGFA-231ENST00000640499 TMEM265A0A087WTH1 108 aa29.66■■■□□ 2.34
VEGFA-231ENST00000640499 C9IYK1 514 aa29.66■■■□□ 2.34
VEGFA-231ENST00000640499 CAPSQ13938 189 aa29.66■■■□□ 2.34
VEGFA-231ENST00000640499 FOXD4L6Q3SYB3 417 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-231ENST00000640499 FOXD4L3Q6VB84 417 aaPredicted RBP29.66■■■□□ 2.34
VEGFA-231ENST00000640499 RNF149Q8NC42 400 aa29.66■■■□□ 2.34
VEGFA-231ENST00000640499 BSNDQ8WZ55 320 aa29.66■■■□□ 2.34
VEGFA-231ENST00000640499 EPSTI1Q96J88 318 aa29.66■■■□□ 2.34
VEGFA-231ENST00000640499 GUCD1Q96NT3 240 aa29.66■■■□□ 2.34
VEGFA-231ENST00000640499 FAM189BP81408 668 aa29.65■■■□□ 2.34
VEGFA-231ENST00000640499 MXD4Q14582 209 aaPredicted RBP29.65■■■□□ 2.34
VEGFA-231ENST00000640499 GRIN2CQ14957 1233 aa29.65■■■□□ 2.34
VEGFA-231ENST00000640499 ODR4Q5SWX8 454 aa29.65■■■□□ 2.34
VEGFA-231ENST00000640499 MCPH1Q8NEM0 835 aa29.65■■■□□ 2.34
VEGFA-231ENST00000640499 ZBED2Q9BTP6 218 aa29.65■■■□□ 2.34
VEGFA-231ENST00000640499 RC3H2Q9HBD1 1191 aaKnown RBP29.65■■■□□ 2.34
VEGFA-231ENST00000640499 PTENP60484 403 aa29.64■■■□□ 2.34
VEGFA-231ENST00000640499 TAP1Q03518 808 aa29.64■■■□□ 2.34
VEGFA-231ENST00000640499 BECN1Q14457 450 aa29.64■■■□□ 2.34
VEGFA-231ENST00000640499 C1orf186Q6ZWK4 172 aa29.64■■■□□ 2.34
VEGFA-231ENST00000640499 IFNLR1Q8IU57 520 aaPredicted RBP29.64■■■□□ 2.34
VEGFA-231ENST00000640499 SP7Q8TDD2 431 aaPredicted RBP29.64■■■□□ 2.34
VEGFA-231ENST00000640499 RUSC1Q9BVN2 902 aa29.64■■■□□ 2.34
VEGFA-231ENST00000640499 CCSER1Q9C0I3 900 aa29.64■■■□□ 2.34
VEGFA-231ENST00000640499 SLC28A3Q9HAS3 691 aa29.64■■■□□ 2.34
VEGFA-231ENST00000640499 POU5F1BQ06416 359 aa29.63■■■□□ 2.33
VEGFA-231ENST00000640499 KARSQ15046 597 aaKnown RBP29.63■■■□□ 2.33
VEGFA-231ENST00000640499 FAM102BQ5T8I3 360 aa29.63■■■□□ 2.33
VEGFA-231ENST00000640499 RINT1Q6NUQ1 792 aa29.63■■■□□ 2.33
VEGFA-231ENST00000640499 FAM43BQ6ZT52 329 aaPredicted RBP29.63■■■□□ 2.33
VEGFA-231ENST00000640499 SRGAP1Q7Z6B7 1085 aa29.63■■■□□ 2.33
VEGFA-231ENST00000640499 CHAMP1Q96JM3 812 aa29.63■■■□□ 2.33
VEGFA-231ENST00000640499 ZNF396Q96N95 335 aaPredicted RBP29.63■■■□□ 2.33
VEGFA-231ENST00000640499 BLOC1S4Q9NUP1 217 aa29.63■■■□□ 2.33
VEGFA-231ENST00000640499 INSL6Q9Y581 213 aa29.63■■■□□ 2.33
VEGFA-231ENST00000640499 SLC26A4O43511 780 aa29.62■■■□□ 2.33
VEGFA-231ENST00000640499 UBA7P41226 1012 aa29.62■■■□□ 2.33
VEGFA-231ENST00000640499 DAW1Q8N136 415 aa29.62■■■□□ 2.33
VEGFA-231ENST00000640499 ZNF689Q96CS4 500 aaPredicted RBP29.62■■■□□ 2.33
VEGFA-231ENST00000640499 INO80BQ9C086 356 aaPredicted RBP29.62■■■□□ 2.33
VEGFA-231ENST00000640499 NT5C3AQ9H0P0 336 aa29.62■■■□□ 2.33
VEGFA-231ENST00000640499 DAXXQ9UER7 740 aaPredicted RBP29.62■■■□□ 2.33
VEGFA-231ENST00000640499 DENND3A2RUS2 1198 aa29.61■■■□□ 2.33
VEGFA-231ENST00000640499 DGKIO75912 1065 aa29.61■■■□□ 2.33
VEGFA-231ENST00000640499 SARSP49591 514 aaKnown RBP29.61■■■□□ 2.33
VEGFA-231ENST00000640499 SLC12A3P55017 1021 aa29.61■■■□□ 2.33
VEGFA-231ENST00000640499 PPP2R2DQ66LE6 453 aa29.61■■■□□ 2.33
VEGFA-231ENST00000640499 SLC24A5Q71RS6 500 aa29.61■■■□□ 2.33
VEGFA-231ENST00000640499 KCTD17Q8N5Z5 321 aa29.61■■■□□ 2.33
VEGFA-231ENST00000640499 SYT2Q8N9I0 419 aaPredicted RBP29.61■■■□□ 2.33
VEGFA-231ENST00000640499 SYMPKQ92797 1274 aaKnown RBP29.61■■■□□ 2.33
VEGFA-231ENST00000640499 C1orf112Q9NSG2 853 aa29.61■■■□□ 2.33
VEGFA-231ENST00000640499 LINC01553A4QN01 128 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 YEATS4O95619 227 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 PLCG1P19174 1290 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 SFPQP23246 707 aaKnown RBP eCLIP29.6■■■□□ 2.33
VEGFA-231ENST00000640499 HOXA11P31270 313 aaPredicted RBP29.6■■■□□ 2.33
VEGFA-231ENST00000640499 DDIT3P35638 169 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 DNM1Q05193 864 aaKnown RBP29.6■■■□□ 2.33
VEGFA-231ENST00000640499 MBTD1Q05BQ5 628 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 MAPK7Q13164 816 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 STK38Q15208 465 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 AMHR2Q16671 573 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 NPAS4Q8IUM7 802 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 KRI1Q8N9T8 703 aaKnown RBP29.6■■■□□ 2.33
VEGFA-231ENST00000640499 CDX2Q99626 313 aaPredicted RBP29.6■■■□□ 2.33
VEGFA-231ENST00000640499 NFKBIZQ9BYH8 718 aa29.6■■■□□ 2.33
VEGFA-231ENST00000640499 EPOPA6NHQ4 379 aa29.59■■■□□ 2.33
VEGFA-231ENST00000640499 SPTLC2O15270 562 aa29.59■■■□□ 2.33
VEGFA-231ENST00000640499 PLA2G4BP0C869 781 aa29.59■■■□□ 2.33
VEGFA-231ENST00000640499 GATMP50440 423 aa29.59■■■□□ 2.33
VEGFA-231ENST00000640499 ARSHQ5FYA8 562 aa29.59■■■□□ 2.33
VEGFA-231ENST00000640499 CATSPER4Q7RTX7 472 aa29.59■■■□□ 2.33
VEGFA-231ENST00000640499 CERS4Q9HA82 394 aa29.59■■■□□ 2.33
VEGFA-231ENST00000640499 PPP6R2O75170 966 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 LINC00271P0C7V0 271 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 PHKA2P46019 1235 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 TFDP1Q14186 410 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 CALML4Q96GE6 196 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 CDK5RAP3Q96JB5 506 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 YME1L1Q96TA2 773 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 CHST12Q9NRB3 414 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 AGPAT5Q9NUQ2 364 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 RNF19AQ9NV58 838 aa29.58■■■□□ 2.33
VEGFA-231ENST00000640499 A0A087X0B3 334 aa29.57■■■□□ 2.32
VEGFA-231ENST00000640499 ZSCAN20P17040 1043 aaPredicted RBP29.57■■■□□ 2.32
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