RNA–Protein interactions for RNA: ENST00000640440.1

HNRNPU-229, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-229ENST00000640440 C8orf76Q96K31 380 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 LLPHQ9BRT6 129 aaKnown RBP16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 TMEM117Q9H0C3 514 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 ZSWIM4Q9H7M6 989 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 AAASQ9NRG9 546 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 TYW1Q9NV66 732 aaKnown RBP16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 DACT1Q9NYF0 836 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 PCDHB12Q9Y5F1 795 aa16.11■□□□□ 0.17
HNRNPU-229ENST00000640440 IRS1P35568 1242 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 RFC5P40937 340 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 TXKP42681 527 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 EMC2Q15006 297 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 XKR9Q5GH70 373 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 PTCRAQ6ISU1 281 aaPredicted RBP16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 ABI1Q8IZP0 508 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 COLGALT1Q8NBJ5 622 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 NEK9Q8TD19 979 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 ZSCAN31Q96LW9 406 aaPredicted RBP16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 CASD1Q96PB1 797 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 EIF2AK1Q9BQI3 630 aaKnown RBP16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 IGFLR1Q9H665 355 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 DHX33Q9H6R0 707 aaKnown RBP16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 TTC12Q9H892 705 aaPredicted RBP16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 SH2B1Q9NRF2 756 aaPredicted RBP16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 PCDHA12Q9UN75 941 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 PIN4Q9Y237 131 aaKnown RBP16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 PPME1Q9Y570 386 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 COL4A3BPQ9Y5P4 624 aa16.1■□□□□ 0.17
HNRNPU-229ENST00000640440 A0A0U1RQF3 1178 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 ZBTB39O15060 712 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 NCK2O43639 380 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 IL9P15248 144 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 ATF7P17544 494 aaPredicted RBP16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 LAG3P18627 525 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 MCM7P33993 719 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 GTF2F1P35269 517 aaKnown RBP eCLIP16.09■□□□□ 0.179e-8■■■□□ 18.9
HNRNPU-229ENST00000640440 CLLU1OSQ5K130 101 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 TWF2Q6IBS0 349 aaKnown RBP16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 OTUD6AQ7L8S5 288 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 CATSPER4Q7RTX7 472 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 ZNF598Q86UK7 904 aaKnown RBP16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 EXOC8Q8IYI6 725 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 THNSL1Q8IYQ7 743 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 LRRC43Q8N309 656 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 PSPC1Q8WXF1 523 aaKnown RBP16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 INO80BQ9C086 356 aaPredicted RBP16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 TMEM60Q9H2L4 133 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 CWH43Q9H720 699 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 CHST12Q9NRB3 414 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
HNRNPU-229ENST00000640440 TDRD15B5MCY1 1934 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 POTEMA6NI47 508 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 FGF18O76093 207 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 SLITRK3O94933 977 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 SRGAP2CP0DJJ0 459 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 LTBRP36941 435 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 HMGN5P82970 282 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 CSPP1Q1MSJ5 1256 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 CTC1Q2NKJ3 1217 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 ADGRD2Q7Z7M1 963 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 HELQQ8TDG4 1101 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 PRPF31Q8WWY3 499 aaKnown RBP16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 PPP2R3CQ969Q6 453 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 MTMR9Q96QG7 549 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 MTRQ99707 1265 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 IFT122Q9HBG6 1241 aa16.08■□□□□ 0.16
HNRNPU-229ENST00000640440 GRXCR2A6NFK2 248 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 LINC01565O15544 149 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 TBX10O75333 385 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 EOMESO95936 686 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 PBX3P40426 434 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 PHKA2P46019 1235 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 RBM25P49756 843 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 UBE3AQ05086 875 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 DLX2Q07687 328 aaPredicted RBP16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 LAMTOR4Q0VGL1 99 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 CLUL1Q15846 466 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 PUS10Q3MIT2 529 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 FERMT3Q86UX7 667 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 FAM184AQ8NB25 1140 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 CCDC43Q96MW1 224 aaKnown RBP16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 HSD17B14Q9BPX1 270 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 TLR9Q9NR96 1032 aa16.07■□□□□ 0.16
HNRNPU-229ENST00000640440 GAS2O43903 313 aaKnown RBP16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 LYPLA2O95372 231 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 NRIP1P48552 1158 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 GNL2Q13823 731 aaKnown RBP16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 ZNF174Q15697 407 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 LONRF3Q496Y0 759 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 SRGAP1Q7Z6B7 1085 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 RBM23Q86U06 439 aaKnown RBP16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 RNF149Q8NC42 400 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 FBXO18Q8NFZ0 1043 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 MICAL1Q8TDZ2 1067 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 TCP11Q8WWU5 503 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 LPPQ93052 612 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 ZNF558Q96NG5 402 aa16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 FOXP1Q9H334 677 aaPredicted RBP16.06■□□□□ 0.16
HNRNPU-229ENST00000640440 MINDY3Q9H8M7 445 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms