RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 DARSP14868 501 aaKnown RBP14.62□□□□□ -0.07
GTF3A-209ENST00000640289 EIF4BP23588 611 aaKnown RBP14.62□□□□□ -0.07
GTF3A-209ENST00000640289 SYKP43405 635 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 CDC42EP1Q00587 391 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 GIT2Q14161 759 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 CSPP1Q1MSJ5 1256 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 PLEKHG4Q58EX7 1191 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 TMEM240Q5SV17 173 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 C9orf50Q5SZB4 431 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 CLEC17AQ6ZS10 378 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 TSHZ1Q6ZSZ6 1077 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 FAM228AQ86W67 206 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 GRAMD1CQ8IYS0 662 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 RPUSD2Q8IZ73 545 aaKnown RBP14.62□□□□□ -0.07
GTF3A-209ENST00000640289 DDX12PQ92771 950 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 KIFAP3Q92845 792 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 IFIH1Q9BYX4 1025 aaKnown RBP14.62□□□□□ -0.07
GTF3A-209ENST00000640289 GCOM2Q9BZD3 368 aaPredicted RBP14.62□□□□□ -0.07
GTF3A-209ENST00000640289 CUEDC2Q9H467 287 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 MINDY3Q9H8M7 445 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 KCND2Q9NZV8 630 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 TCHHQ07283 1943 aa14.62□□□□□ -0.07
GTF3A-209ENST00000640289 LRRIQ4A6NIV6 560 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 PRPF40AO75400 957 aaKnown RBP14.61□□□□□ -0.07
GTF3A-209ENST00000640289 FGBP02675 491 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 CASP1P29466 404 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 AFMP43652 599 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 NFX1Q12986 1120 aaKnown RBP14.61□□□□□ -0.07
GTF3A-209ENST00000640289 TFDP1Q14186 410 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 LONRF3Q496Y0 759 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 CNKSR3Q6P9H4 555 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 PSRC1Q6PGN9 363 aaPredicted RBP14.61□□□□□ -0.07
GTF3A-209ENST00000640289 OTOP2Q7RTS6 562 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 ZNF710Q8N1W2 664 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 DRC1Q96MC2 740 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 KIFC3Q9BVG8 833 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 TIPINQ9BVW5 301 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 KBTBD4Q9NVX7 518 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 PADI3Q9ULW8 664 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 ST3GAL5Q9UNP4 418 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 SQORQ9Y6N5 450 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 SIP14410 1827 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 SCN5AQ14524 2016 aa14.61□□□□□ -0.07
GTF3A-209ENST00000640289 EVPLQ92817 2033 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 ZNF202O95125 648 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 PFKMP08237 780 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 SLFN14P0C7P3 912 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 PHKA2P46019 1235 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 PEX3P56589 373 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 PTENP60484 403 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 PAK2Q13177 524 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 SHHQ15465 462 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 CEP57L1Q8IYX8 460 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 USP38Q8NB14 1042 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 SEPT8Q92599 483 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 DNAJC19Q96DA6 116 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 IFT74Q96LB3 600 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 PYM1Q9BRP8 204 aaKnown RBP14.6□□□□□ -0.07
GTF3A-209ENST00000640289 TNMDQ9H2S6 317 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 ZHX3Q9H4I2 956 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 ERVK-5Q9HDB9 667 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 ODF2LQ9ULJ1 636 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 ADGRA3Q8IWK6 1321 aa14.6□□□□□ -0.07
GTF3A-209ENST00000640289 TNRC18O15417 2968 aaPredicted RBP14.6□□□□□ -0.07
GTF3A-209ENST00000640289 CCDC169A6NNP5 214 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 INO80B-WBP1J3KQ70 363 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 MGEA5O60502 916 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 TBCAO75347 108 aaKnown RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 FAM13AO94988 1023 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 PLS3P13797 630 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 LIG1P18858 919 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 BMP8BP34820 402 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 NAMPTP43490 491 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 NPTX2P47972 431 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 POU5F1BQ06416 359 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 SNW1Q13573 536 aaKnown RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 PPP2R5AQ15172 486 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 PRPF38BQ5VTL8 546 aaKnown RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 CDCA2Q69YH5 1023 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 KRBA2Q6ZNG9 492 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 SRGAP1Q7Z6B7 1085 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 IFNLR1Q8IU57 520 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 FMR1NBQ8N0W7 255 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 ENGASEQ8NFI3 743 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 DEPTORQ8TB45 409 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 PAGE5Q96GU1 130 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 TRIM9Q9C026 710 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 INO80BQ9C086 356 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 BLZF1Q9H2G9 400 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 PRO3102Q9H379 93 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 TMX1Q9H3N1 280 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 MAGEF1Q9HAY2 307 aa14.59□□□□□ -0.07
GTF3A-209ENST00000640289 CXXC1Q9P0U4 656 aaPredicted RBP14.59□□□□□ -0.07
GTF3A-209ENST00000640289 ZBBXA8MT70 800 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 GPR182O15218 404 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 SLC16A4O15374 487 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 ACTN1P12814 892 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 IDEP14735 1019 aa14.58□□□□□ -0.08
GTF3A-209ENST00000640289 SFPQP23246 707 aaKnown RBP eCLIP14.58□□□□□ -0.08
GTF3A-209ENST00000640289 ZNF131P52739 623 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms