RNA–Protein interactions for RNA: ENST00000640091.1

NECAP1-223, Transcript of NECAP endocytosis associated 1, human

TSL 2

Gene NECAP1, Length 2,115 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAP1-223	ENST00000640091	PPP4R3CP	Q6ZMV5	832 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	METTL13	Q8N6R0	699 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	PRPF31	Q8WWY3	499 aa	Known RBP	11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZNF668	Q96K58	619 aa	Predicted RBP	11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	IFT74	Q96LB3	600 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	C17orf75	Q9HAS0	396 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	TBX20	Q9UMR3	447 aa		11.5	□□□□□ -0.57
NECAP1-223	ENST00000640091	LRRIQ4	A6NIV6	560 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	GPR25	O00155	361 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	AKAP3	O75969	853 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	CYP2J2	P51589	502 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	LRMP	Q12912	555 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	MIIP	Q5JXC2	388 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	MFSD14C	Q5VZR4	134 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	SPECC1L	Q69YQ0	1117 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	EFCAB12	Q6NXP0	572 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	HS2ST1	Q7LGA3	356 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	RDH13	Q8NBN7	331 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	SPIRE2	Q8WWL2	714 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	CEP63	Q96MT8	703 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	ACCS	Q96QU6	501 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	PCIF1	Q9H4Z3	704 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	TMEM206	Q9H813	350 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	AGPAT3	Q9NRZ7	376 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	TSKS	Q9UJT2	592 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	LOXHD1	Q8IVV2	1947 aa		11.49	□□□□□ -0.57
NECAP1-223	ENST00000640091	MYH11	P35749	1972 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	SRGAP2C	P0DJJ0	459 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	KLRC1	P26715	233 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	RTP1	P59025	263 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CACNB2	Q08289	660 aa	Predicted RBP	11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CCDC155	Q8N6L0	562 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CACTIN	Q8WUQ7	758 aa	Known RBP	11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CPLX3	Q8WVH0	158 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CFHR5	Q9BXR6	569 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	AP5M1	Q9H0R1	490 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	KCNF1	Q9H3M0	494 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	ST6GALNAC4	Q9H4F1	302 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZNF215	Q9UL58	517 aa	Predicted RBP	11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	IGF2BP2	Q9Y6M1	599 aa	Known RBP eCLIP	11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	DNAH12	Q6ZR08	3092 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	IGKV6-21	A0A0C4DH24	114 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	ANKRD63	C9JTQ0	380 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	HOXD8	P13378	290 aa	Predicted RBP	11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CYBA	P13498	195 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	AKR1A1	P14550	325 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	RPL13	P26373	211 aa	Known RBP	11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	PBX1	P40424	430 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CLCN3	P51790	818 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CAPS	Q13938	189 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	VWA3B	Q502W6	1294 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	TAS1R3	Q7RTX0	852 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	RHPN2	Q8IUC4	686 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZC3H3	Q8IXZ2	948 aa	Known RBP	11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZSWIM2	Q8NEG5	633 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	CBWD1	Q9BRT8	395 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	NDST4	Q9H3R1	872 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	SETD4	Q9NVD3	440 aa		11.48	□□□□□ -0.57
NECAP1-223	ENST00000640091	UBE4B	O95155	1302 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	MYADML2	A6NDP7	307 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	LGALS16	A8MUM7	142 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	TULP1	O00294	542 aa	Predicted RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	PGK1	P00558	417 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	TPM2	P07951	284 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	MYL3	P08590	195 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	C6orf222	P0C671	652 aa	Predicted RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	KLK7	P49862	253 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	LAMTOR4	Q0VGL1	99 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	IRF5	Q13568	498 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	ALCAM	Q13740	583 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	KIAA0753	Q2KHM9	967 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	HS1BP3	Q53T59	392 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	IER5	Q5VY09	327 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	ARMCX5	Q6P1M9	558 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	LRRC8A	Q8IWT6	810 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	SLC17A8	Q8NDX2	589 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	DEPTOR	Q8TB45	409 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	KAT2B	Q92831	832 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	PPP1R16B	Q96T49	567 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	ARHGAP28	Q9P2N2	729 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	SUCLA2	Q9P2R7	463 aa	Predicted RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	IMPACT	Q9P2X3	320 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	SRRD	Q9UH36	339 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	RBAK-RBAKDN	I3L0D1	243 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091		K7ERI5	159 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	C22orf31	O95567	290 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	GNA14	O95837	355 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	MYCN	P04198	464 aa	Predicted RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	CCND3	P30281	292 aa	Predicted RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	ADSS	P30520	456 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	NAMPT	P43490	491 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	ADK	P55263	362 aa	Known RBP	11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	PPFIA1	Q13136	1202 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	MAN2A1	Q16706	1144 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	ZNF484	Q5JVG2	852 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	MARCH8	Q5T0T0	291 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	MAP4K3	Q8IVH8	894 aa		11.47	□□□□□ -0.57
NECAP1-223	ENST00000640091	RNF149	Q8NC42	400 aa		11.47	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms