RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SLC18A3Q16572 532 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 DCAF17Q5H9S7 520 aaPredicted RBP16.49■□□□□ 0.23
TRIM3-215ENST00000639856 WDR93Q6P2C0 686 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 RNF10Q8N5U6 811 aaKnown RBP16.49■□□□□ 0.23
TRIM3-215ENST00000639856 SLC35C1Q96A29 364 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 IWS1Q96ST2 819 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 MAF1Q9H063 256 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 JPH1Q9HDC5 661 aaPredicted RBP16.49■□□□□ 0.23
TRIM3-215ENST00000639856 LUC7LQ9NQ29 371 aaKnown RBP16.49■□□□□ 0.23
TRIM3-215ENST00000639856 ST7Q9NRC1 585 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 UBE4BO95155 1302 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 LRRC37A2A6NM11 1700 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 ZNF185O15231 689 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 PGK2P07205 417 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 CYP2C8P10632 490 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 ACTN1P12814 892 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 UCHL3P15374 230 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 PON1P27169 355 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 VSNL1P62760 191 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 KLHL30Q0D2K2 578 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 ASIC2Q16515 512 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 GNPTABQ3T906 1256 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 ODR4Q5SWX8 454 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 TCERG1LQ5VWI1 586 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 SEPT14Q6ZU15 432 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 ZNF720Q7Z2F6 126 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 FAM178BQ8IXR5 827 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 C4orf19Q8IY42 314 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 FAM133AQ8N9E0 248 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 BORCS6Q96GS4 357 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 UBXN6Q9BZV1 441 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 RRAGCQ9HB90 399 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 SALL4Q9UJQ4 1053 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 PCDHA10Q9Y5I2 948 aa16.49■□□□□ 0.23
TRIM3-215ENST00000639856 STAM2O75886 525 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 NPEPPSP55786 919 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 KLHDC7AQ5VTJ3 777 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 STXBP4Q6ZWJ1 553 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 SENP7Q9BQF6 1050 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 GBP3Q9H0R5 595 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 GABBR1Q9UBS5 961 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 SLC9A2Q9UBY0 812 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 PCDHB13Q9Y5F0 798 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 NFASCO94856 1347 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 GTPBP10A4D1E9 387 aaKnown RBP16.48■□□□□ 0.23
TRIM3-215ENST00000639856 MAP2K7O14733 419 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 ZNF862O60290 1169 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 EIF3JO75822 258 aaKnown RBP16.48■□□□□ 0.23
TRIM3-215ENST00000639856 OSBPP22059 807 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 ARID5AQ03989 594 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 GBP6Q6ZN66 633 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 ANKRD13CQ8N6S4 541 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 CAGE1Q8TC20 777 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 ZNF526Q8TF50 670 aaPredicted RBP16.48■□□□□ 0.23
TRIM3-215ENST00000639856 CDHR1Q96JP9 859 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 NOX5Q96PH1 765 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 MKNK1Q9BUB5 465 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 ABCB6Q9NP58 842 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 FBXL5Q9UKA1 691 aa16.48■□□□□ 0.23
TRIM3-215ENST00000639856 A0A087X0T9 212 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 PDE2AO00408 941 aaPredicted RBP16.47■□□□□ 0.23
TRIM3-215ENST00000639856 FAM228BP0C875 321 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 PSMC2P35998 433 aaKnown RBP16.47■□□□□ 0.23
TRIM3-215ENST00000639856 ACTR2P61160 394 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 SWSAP1Q6NVH7 229 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 ANO5Q75V66 913 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 EEPD1Q7L9B9 569 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 CREG2Q8IUH2 290 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 CCDC60Q8IWA6 550 aaPredicted RBP16.47■□□□□ 0.23
TRIM3-215ENST00000639856 DRC1Q96MC2 740 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 CCDC43Q96MW1 224 aaKnown RBP16.47■□□□□ 0.23
TRIM3-215ENST00000639856 SPAG5Q96R06 1193 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 GPRC5CQ9NQ84 441 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 L1RE1Q9UN81 338 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 MCM3APO60318 1980 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 ARID2Q68CP9 1835 aa16.47■□□□□ 0.23
TRIM3-215ENST00000639856 TCP1P17987 556 aaKnown RBP16.46■□□□□ 0.23
TRIM3-215ENST00000639856 EDNRBP24530 442 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 TERF2Q15554 542 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 XKR9Q5GH70 373 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 WDR78Q5VTH9 848 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 IQCEQ6IPM2 695 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 CYFIP1Q7L576 1253 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 HS2ST1Q7LGA3 356 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 IRF2BP2Q7Z5L9 587 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 FAM186BQ8IYM0 893 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 RDM1Q8NG50 284 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 FGD4Q96M96 766 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.46■□□□□ 0.23
TRIM3-215ENST00000639856 ADAMTS1Q9UHI8 967 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 BZW2Q9Y6E2 419 aaKnown RBP16.46■□□□□ 0.23
TRIM3-215ENST00000639856 MYH9P35579 1960 aaKnown RBP16.46■□□□□ 0.23
TRIM3-215ENST00000639856 ZNFX1Q9P2E3 1918 aaKnown RBP16.46■□□□□ 0.23
TRIM3-215ENST00000639856 SLC25A27O95847 323 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 SMC1AQ14683 1233 aaKnown RBP16.46■□□□□ 0.23
TRIM3-215ENST00000639856 HDXQ7Z353 690 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 ZNF572Q7Z3I7 529 aaPredicted RBP16.46■□□□□ 0.23
TRIM3-215ENST00000639856 MS4A4AQ96JQ5 239 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 OSBPL9Q96SU4 736 aa16.46■□□□□ 0.23
TRIM3-215ENST00000639856 SIX2Q9NPC8 291 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms