RNA–Protein interactions for RNA: ENST00000638965.1

PAX6-247, Transcript of paired box 6, humanhuman

TSL 5 BASIC

Gene PAX6, Length 979 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-247ENST00000638965 ANKRD45Q5TZF3 282 aa13.83□□□□□ -0.2
PAX6-247ENST00000638965 RPAINQ86UA6 219 aa13.83□□□□□ -0.2
PAX6-247ENST00000638965 RNPEPQ9H4A4 650 aa13.83□□□□□ -0.2
PAX6-247ENST00000638965 TUT1Q9H6E5 874 aaKnown RBP13.83□□□□□ -0.2
PAX6-247ENST00000638965 MAP3K20Q9NYL2 800 aaKnown RBP13.83□□□□□ -0.2
PAX6-247ENST00000638965 ZSWIM5Q9P217 1185 aa13.83□□□□□ -0.2
PAX6-247ENST00000638965 TELO2Q9Y4R8 837 aa13.83□□□□□ -0.2
PAX6-247ENST00000638965 KAT6AQ92794 2004 aa13.83□□□□□ -0.2
PAX6-247ENST00000638965 VPS13AQ96RL7 3174 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 TBX10O75333 385 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 AMPD1P23109 780 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 TYRO3Q06418 890 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 HYAL1Q12794 435 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 SEC23AQ15436 765 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 RTN1Q16799 776 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 CLP1Q92989 425 aaKnown RBP13.82□□□□□ -0.2
PAX6-247ENST00000638965 INPP4AQ96PE3 977 aaPredicted RBP13.82□□□□□ -0.2
PAX6-247ENST00000638965 UIMC1Q96RL1 719 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 IFIH1Q9BYX4 1025 aaKnown RBP13.82□□□□□ -0.2
PAX6-247ENST00000638965 BRD7Q9NPI1 651 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 MAD2L2Q9UI95 211 aa13.82□□□□□ -0.2
PAX6-247ENST00000638965 ZNF213O14771 459 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 ZBTB5O15062 677 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 GRM6O15303 877 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 SDSP20132 328 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 CCND2P30279 289 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 MRPS9P82933 396 aaKnown RBP13.81□□□□□ -0.2
PAX6-247ENST00000638965 HDAC1Q13547 482 aaPredicted RBP13.81□□□□□ -0.2
PAX6-247ENST00000638965 CAMK1Q14012 370 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 HIF1AQ16665 826 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 HERC4Q5GLZ8 1057 aaPredicted RBP13.81□□□□□ -0.2
PAX6-247ENST00000638965 SAMD3Q8N6K7 520 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 LMBR1Q8WVP7 490 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 APBB2Q92870 758 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 VAT1LQ9HCJ6 419 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 CLDND1Q9NY35 253 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 MKL2Q9ULH7 1088 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 FAM50BQ9Y247 325 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 ADGRA3Q8IWK6 1321 aa13.81□□□□□ -0.2
PAX6-247ENST00000638965 MBTPS2O43462 519 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 DHX16O60231 1041 aaKnown RBP13.8□□□□□ -0.2
PAX6-247ENST00000638965 CHRNA1P02708 482 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 ICAM3P32942 547 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 CTNNB1P35222 781 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 MFAP1P55081 439 aaKnown RBP13.8□□□□□ -0.2
PAX6-247ENST00000638965 ELOAQ14241 798 aaKnown RBP13.8□□□□□ -0.2
PAX6-247ENST00000638965 METTL7BQ6UX53 244 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 SYT9Q86SS6 491 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 GPR20Q99678 358 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 SLC30A3Q99726 388 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 LMAN2LQ9H0V9 348 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 EHMT1Q9H9B1 1298 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 SETD4Q9NVD3 440 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 MUTYHQ9UIF7 546 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 PCDHA1Q9Y5I3 950 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 LOXHD1Q8IVV2 1947 aa13.8□□□□□ -0.2
PAX6-247ENST00000638965 PLXNA4Q9HCM2 1894 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 KLRF2D3W0D1 207 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 NCK2O43639 380 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 CYTH3O43739 400 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 RB1P06400 928 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 GTF2F1P35269 517 aaKnown RBP eCLIP13.79□□□□□ -0.2
PAX6-247ENST00000638965 BMPR1AP36894 532 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 MGAT3Q09327 533 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 SMAD4Q13485 552 aaKnown RBP13.79□□□□□ -0.2
PAX6-247ENST00000638965 FIBCD1Q8N539 461 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 ZNF689Q96CS4 500 aaPredicted RBP13.79□□□□□ -0.2
PAX6-247ENST00000638965 IL17RAQ96F46 866 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 MSLNLQ96KJ4 702 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 C11orf84Q9BUA3 381 aaPredicted RBP13.79□□□□□ -0.2
PAX6-247ENST00000638965 DSCC1Q9BVC3 393 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 USP26Q9BXU7 913 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 IL25Q9H293 177 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 RIOX1Q9H6W3 641 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 MLXIPQ9HAP2 919 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 ZMIZ1Q9ULJ6 1067 aa13.79□□□□□ -0.2
PAX6-247ENST00000638965 SUPT16HQ9Y5B9 1047 aaKnown RBP13.79□□□□□ -0.2
PAX6-247ENST00000638965 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.78□□□□□ -0.2
PAX6-247ENST00000638965 LINC01565O15544 149 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 MMP1P03956 469 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 LINC00114Q6XXX2 140 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 RUFY4Q6ZNE9 571 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 BTLAQ7Z6A9 289 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 LINC01599Q8WXQ3 324 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 LNPKQ9C0E8 428 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 ALG13Q9NP73 1137 aaKnown RBP13.78□□□□□ -0.2
PAX6-247ENST00000638965 DCHS1Q96JQ0 3298 aa13.78□□□□□ -0.2
PAX6-247ENST00000638965 GCOM1H8Y6P7 765 aaPredicted RBP13.77□□□□□ -0.21
PAX6-247ENST00000638965 EYA4O95677 639 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 POLR2MP0CAP2 368 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 SPEM2Q0P670 501 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 LPIN1Q14693 890 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 GRM4Q14833 912 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 CLUL1Q15846 466 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 IFIT1BQ5T764 474 aaKnown RBP13.77□□□□□ -0.21
PAX6-247ENST00000638965 CHSY3Q70JA7 882 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 CYB5R4Q7L1T6 521 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 CYFIP1Q7L576 1253 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 PRSS33Q8NF86 280 aa13.77□□□□□ -0.21
PAX6-247ENST00000638965 PIGSQ96S52 555 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms