RNA–Protein interactions for RNA: ENST00000638755.1

PAX6-238, Transcript of paired box 6, human

TSL 5 BASIC

Gene PAX6, Length 1,161 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PAX6-238	ENST00000638755	COL26A1	Q96A83	441 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	ZNF668	Q96K58	619 aa	Predicted RBP	13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	VN1R3	Q9BXE9	311 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	GBP3	Q9H0R5	595 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	SLC2A4RG	Q9NR83	387 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	KCNH7	Q9NS40	1196 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	NUMBL	Q9Y6R0	609 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	COL4A3	Q01955	1670 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	SALL3	Q9BXA9	1300 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	FRY	Q5TBA9	3013 aa		13.37	□□□□□ -0.27
PAX6-238	ENST00000638755	LAMA4	Q16363	1823 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	DOCK8	Q8NF50	2099 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	CEP295	Q9C0D2	2601 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755		A0A0U1RQF3	1178 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	FAM170B	A6NMN3	283 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	C2CD2L	O14523	706 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	INPPL1	O15357	1258 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	MAFG	O15525	162 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	TBC1D4	O60343	1298 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	LILRB5	O75023	590 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	LAMP2	P13473	410 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	SLC26A2	P50443	739 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	GPC5	P78333	572 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	UBE2S	Q16763	222 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	IMMT	Q16891	758 aa	Known RBP	13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	CYB5R4	Q7L1T6	521 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	ZNF598	Q86UK7	904 aa	Known RBP	13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	SMG7	Q92540	1137 aa	Known RBP	13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	RILPL2	Q969X0	211 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	CNNM2	Q9H8M5	875 aa		13.36	□□□□□ -0.27
PAX6-238	ENST00000638755	ZBTB42	B2RXF5	422 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	RFPL2	O75678	378 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	C22orf31	O95567	290 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	GALT	P07902	379 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	CD72	P21854	359 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	FGFR4	P22455	802 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	NLRP11	P59045	1033 aa	Known RBP	13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	RNASEL	Q05823	741 aa	Known RBP	13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	HTR4	Q13639	388 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	ZNF484	Q5JVG2	852 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	FAM160B1	Q5W0V3	765 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	GET4	Q7L5D6	327 aa	Predicted RBP	13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	CKAP2L	Q8IYA6	745 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	CMAS	Q8NFW8	434 aa	Predicted RBP	13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	RRP36	Q96EU6	259 aa	Known RBP	13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	RPP25	Q9BUL9	199 aa	Known RBP	13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	NRDE2	Q9H7Z3	1164 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	PSTPIP2	Q9H939	334 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	PIDD1	Q9HB75	910 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	SENP2	Q9HC62	589 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	DNAJB4	Q9UDY4	337 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	ZBTB47	Q9UFB7	747 aa	Predicted RBP	13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	RAB23	Q9ULC3	237 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	AKT3	Q9Y243	479 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	INPP5F	Q9Y2H2	1132 aa		13.35	□□□□□ -0.27
PAX6-238	ENST00000638755	PATJ	Q8NI35	1801 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	COL1A2	P08123	1366 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	SPDYE3	A6NKU9	549 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	ANHX	E9PGG2	379 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	DDX39A	O00148	427 aa	Known RBP	13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	SPATA31D3	P0C874	917 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	SLC11A1	P49279	550 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	CLCN3	P51790	818 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	PDE1A	P54750	535 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	PDXDC2P	Q6P474	469 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	SPATA31D4	Q6ZUB0	917 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	LPP	Q93052	612 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	MRPL17	Q9NRX2	175 aa	Known RBP	13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	TBC1D13	Q9NVG8	400 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	FAM120A	Q9NZB2	1118 aa	Known RBP eCLIP	13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	NFASC	O94856	1347 aa		13.34	□□□□□ -0.27
PAX6-238	ENST00000638755	ASPM	Q8IZT6	3477 aa		13.33	□□□□□ -0.27
PAX6-238	ENST00000638755	GDF9	O60383	454 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	ATG7	O95352	703 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	EIF4B	P23588	611 aa	Known RBP	13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	KIF5B	P33176	963 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	AK2	P54819	239 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	ITGB3BP	Q13352	177 aa	Predicted RBP	13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	MLF2	Q15773	248 aa	Predicted RBP	13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	ELMSAN1	Q6PJG2	1045 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	NELL1	Q92832	810 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	PHKB	Q93100	1093 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	SCLT1	Q96NL6	688 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	MXRA8	Q9BRK3	442 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	ADAMTS10	Q9H324	1103 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	ZNF302	Q9NR11	478 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	SEC63	Q9UGP8	760 aa	Known RBP	13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	PCDHA6	Q9UN73	950 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	PCDHA8	Q9Y5H6	950 aa		13.33	□□□□□ -0.28
PAX6-238	ENST00000638755	IGKV6D-21	A0A0A0MT36	114 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	CARNS1	A5YM72	827 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	IFIT3	O14879	490 aa	Known RBP	13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	LILRB3	O75022	631 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	CSDE1	O75534	798 aa	Known RBP	13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	CCNE2	O96020	404 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	ADH1A	P07327	375 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	SDS	P20132	328 aa		13.32	□□□□□ -0.28
PAX6-238	ENST00000638755	PML	P29590	882 aa		13.32	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 18 ms