RNA–Protein interactions for RNA: ENST00000638725.1

SNIP1-204, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 2

Gene SNIP1, Length 2,761 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-204ENST00000638725 IFI35P80217 286 aaPredicted RBP11.82□□□□□ -0.52
SNIP1-204ENST00000638725 SLC29A2Q14542 456 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 ARHGAP44Q17R89 818 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 CBWD6Q4V339 395 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 CBWD3Q5JTY5 395 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 CBWD5Q5RIA9 395 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 WLSQ5T9L3 541 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 DENND2CQ68D51 928 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 PRR5LQ6MZQ0 368 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 MOXD1Q6UVY6 613 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 TBC1D16Q8TBP0 767 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 PIGOQ8TEQ8 1089 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 ATXN2LQ8WWM7 1075 aaKnown RBP11.82□□□□□ -0.52
SNIP1-204ENST00000638725 CENPTQ96BT3 561 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 STK33Q9BYT3 514 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 MTFR1LQ9H019 292 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 KDM4CQ9H3R0 1056 aa11.82□□□□□ -0.52
SNIP1-204ENST00000638725 DIS3Q9Y2L1 958 aaKnown RBP11.82□□□□□ -0.52
SNIP1-204ENST00000638725 FAM187AA6NFU0 413 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 FAM196BA6NMK8 535 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 C6orf229H3BNL8 230 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 EML1O00423 815 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 GHRP10912 638 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 MMP13P45452 471 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 MAPK7Q13164 816 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 AP3B2Q13367 1082 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 E2F5Q15329 346 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 CYP2W1Q8TAV3 490 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 USP40Q9NVE5 1235 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 RPTORQ8N122 1335 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 CCT8L1PA6NM43 557 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 MSH4O15457 936 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 DNAJC8O75937 253 aaPredicted RBP11.81□□□□□ -0.52
SNIP1-204ENST00000638725 VCAM1P19320 739 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 TNFAIP3P21580 790 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 USH1GQ495M9 461 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 Q4G0T1 1027 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 RINT1Q6NUQ1 792 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 LRRC34Q8IZ02 419 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 P3H4Q92791 437 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 PGM2Q96G03 612 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 NAP1L3Q99457 506 aaPredicted RBP11.81□□□□□ -0.52
SNIP1-204ENST00000638725 EIF2AK1Q9BQI3 630 aaKnown RBP11.81□□□□□ -0.52
SNIP1-204ENST00000638725 SEMA4AQ9H3S1 761 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 GRHL1Q9NZI5 618 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 VAV3Q9UKW4 847 aa11.81□□□□□ -0.52
SNIP1-204ENST00000638725 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 RIMBP2O15034 1052 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 TBX3O15119 743 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 RGS16O15492 202 aaPredicted RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 PPIP5K2O43314 1243 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 PPP1R12BO60237 982 aaPredicted RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 LRRN2O75325 713 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 FAM13AO94988 1023 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 EYA4O95677 639 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 SLCO1A2P46721 670 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 RPL21P46778 160 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 MARCKSL1P49006 195 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 SCNN1DP51172 638 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 CYP2J2P51589 502 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 DHX34Q14147 1143 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 CTTNQ14247 550 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 CERS5Q8N5B7 392 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 MYCT1Q8N699 235 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 KRT35Q92764 455 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 INTS2Q9H0H0 1204 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 OLFML3Q9NRN5 406 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 ODF2LQ9ULJ1 636 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 FRMPD4Q14CM0 1322 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 CCDC169A6NNP5 214 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 TMEM110-MUSTN1A8MSY1 372 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 ZBTB39O15060 712 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 EEF2P13639 858 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 FGFR4P22455 802 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 PTGIRP43119 386 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 ELF3P78545 371 aaPredicted RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 PPP2R5EQ16537 467 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 MSL1Q68DK7 614 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 HIBCHQ6NVY1 386 aaPredicted RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 EPS8L3Q8TE67 593 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 PRMT1Q99873 361 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 INTS9Q9NV88 658 aaKnown RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 CHORDC1Q9UHD1 332 aaPredicted RBP11.8□□□□□ -0.52
SNIP1-204ENST00000638725 RASAL2Q9UJF2 1139 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 BCS1LQ9Y276 419 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 ALG6Q9Y672 507 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 C10orf71Q711Q0 1435 aa11.8□□□□□ -0.52
SNIP1-204ENST00000638725 ANKRD62A6NC57 917 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 MGRN1O60291 552 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 PHF2O75151 1096 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 ELF1P32519 619 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 NF2P35240 595 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 IFNAR2P48551 515 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 NFIAQ12857 509 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 PPP1R7Q15435 360 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 SLFN13Q68D06 897 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 TTC27Q6P3X3 843 aa11.79□□□□□ -0.52
SNIP1-204ENST00000638725 CCDC50Q8IVM0 306 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms